Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC004832.5-201ENST00000608677 401 ntBASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 AC025166.1-201ENST00000612411 163 ntBASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 AC092435.3-201ENST00000565538 3654 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 MIR548A1-201ENST00000385041 97 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 MIRLET7F2-201ENST00000385277 83 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 MIR887-201ENST00000401258 79 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 MIR1263-201ENST00000408324 86 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 AC245047.3-201ENST00000429428 127 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 RN7SL297P-201ENST00000483161 293 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 RN7SKP282-201ENST00000516824 299 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 SCARNA15-202ENST00000516881 127 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 AC026271.5-201ENST00000577873 130 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 AL121890.5-201ENST00000620848 304 ntBASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DQA1Q5Y7H0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 Y_RNA.35-201ENST00000362601 101 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 Y_RNA.242-201ENST00000364473 110 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 SNORD116-21-201ENST00000384507 92 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 AL138827.1-201ENST00000402666 306 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 MIR548O-201ENST00000408583 114 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 RNA5SP344-201ENST00000411081 104 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 AC105272.1-201ENST00000438604 198 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 UBBP3-201ENST00000445497 241 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 RNU7-25P-201ENST00000516544 62 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 MIR4762-201ENST00000585261 75 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 MTND5P18-201ENST00000445624 1801 ntBASIC2.56□□□□□ -2
HLA-DQA1Q5Y7H0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 SNORD14E-201ENST00000364009 85 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 RNU6-442P-201ENST00000383968 104 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 AC063976.4-201ENST00000421971 163 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 BX510359.4-201ENST00000423750 193 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 RNU7-26P-201ENST00000458980 63 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 AC003982.1-202ENST00000469928 248 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 SNORD45.4-201ENST00000516629 73 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 EIF4BP1-201ENST00000554881 351 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 AC006441.5-201ENST00000612680 209 ntBASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
HLA-DQA1Q5Y7H0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 RNU1-58P-201ENST00000362413 163 ntBASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 RNU6-268P-201ENST00000364174 107 ntBASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 U8.5-201ENST00000364528 136 ntBASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 Y_RNA.346-201ENST00000365385 112 ntBASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 SNRPGP14-201ENST00000435400 219 ntBASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 Y_RNA.649-201ENST00000459077 103 ntBASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 CYCTP-201ENST00000504253 315 ntBASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 GTF3AP2-201ENST00000557014 266 ntBASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.54□□□□□ -2
HLA-DQA1Q5Y7H0 SNORA5B-201ENST00000363786 132 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 RNU1-148P-201ENST00000384472 162 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 Y_RNA.547-201ENST00000384654 119 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 RNU6-440P-201ENST00000390882 105 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 SNORD88.1-201ENST00000408684 91 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 RNA5SP21-201ENST00000410917 96 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 AC007064.1-201ENST00000412238 351 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 RNU6-1116P-201ENST00000517269 99 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 AC084364.2-201ENST00000546924 395 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 MIR3126-201ENST00000577443 74 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 MIR5197-201ENST00000583721 112 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 AC134878.1-201ENST00000619901 243 ntBASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DQA1Q5Y7H0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-755P-201ENST00000364400 103 ntBASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 SNORA80E-201ENST00000384744 137 ntBASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNA5SP482-201ENST00000391269 118 ntBASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 RPS29P6-201ENST00000438196 145 ntBASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 RNU6-56P-201ENST00000516986 93 ntBASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 AC005786.1-201ENST00000588553 154 ntBASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.52□□□□□ -2.01
HLA-DQA1Q5Y7H0 MIR8054-201ENST00000620877 86 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms