Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 BTF3P11-201ENST00000426582 477 ntBASIC1.89□□□□□ -2.11
TRIM60Q495X7 U8.19-201ENST00000459095 133 ntBASIC1.89□□□□□ -2.11
TRIM60Q495X7 AL358944.1-201ENST00000528537 144 ntBASIC1.89□□□□□ -2.11
TRIM60Q495X7 AC024405.2-202ENST00000532731 184 ntBASIC1.89□□□□□ -2.11
TRIM60Q495X7 MIR6504-201ENST00000613520 61 ntBASIC1.89□□□□□ -2.11
TRIM60Q495X7 AC100821.1-201ENST00000523153 2479 ntBASIC1.89□□□□□ -2.11
TRIM60Q495X7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.88□□□□□ -2.11
TRIM60Q495X7 SNORA1B-201ENST00000362535 133 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 RNU6-1048P-201ENST00000364054 107 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 SNORA72.4-201ENST00000384174 132 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 MIR1267-201ENST00000408723 78 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 RNU2-38P-201ENST00000410856 79 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 AC104332.1-201ENST00000440471 797 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 AC009474.2-201ENST00000451383 136 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 RNU7-141P-201ENST00000459304 62 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 RPL39P38-201ENST00000467018 153 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 Y_RNA.679-201ENST00000516416 91 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 RNU7-115P-201ENST00000516433 55 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 RNU7-28P-201ENST00000516759 62 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.88□□□□□ -2.11
TRIM60Q495X7 MIR4503-201ENST00000582187 83 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 MIR3149-201ENST00000584629 83 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
TRIM60Q495X7 U2.14-201ENST00000615943 113 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 AC134026.1-201ENST00000623249 2239 ntBASIC1.88□□□□□ -2.11
TRIM60Q495X7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.87□□□□□ -2.11
TRIM60Q495X7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
TRIM60Q495X7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
TRIM60Q495X7 RNU1-42P-201ENST00000364033 160 ntBASIC1.87□□□□□ -2.11
TRIM60Q495X7 RNU6-801P-201ENST00000364087 105 ntBASIC1.87□□□□□ -2.11
TRIM60Q495X7 U8.7-201ENST00000364940 136 ntBASIC1.87□□□□□ -2.11
TRIM60Q495X7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TRIM60Q495X7 RNU6-763P-201ENST00000390865 106 ntBASIC1.87□□□□□ -2.11
TRIM60Q495X7 MIR548H3-201ENST00000408771 118 ntBASIC1.87□□□□□ -2.11
TRIM60Q495X7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.87□□□□□ -2.11
TRIM60Q495X7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.87□□□□□ -2.11
TRIM60Q495X7 AC022254.1-201ENST00000567857 235 ntBASIC1.87□□□□□ -2.11
TRIM60Q495X7 AP003357.1-201ENST00000604497 148 ntBASIC1.87□□□□□ -2.11
TRIM60Q495X7 MIR8074-201ENST00000615081 81 ntBASIC1.87□□□□□ -2.11
TRIM60Q495X7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.87□□□□□ -2.11
TRIM60Q495X7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
TRIM60Q495X7 RNU6-1272P-201ENST00000362776 107 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 RNU6-1205P-201ENST00000363625 106 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 RNU6-439P-201ENST00000384188 106 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 Y_RNA.452-201ENST00000384202 108 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 RNU6-574P-201ENST00000384265 107 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 RNU6-1289P-201ENST00000384431 106 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 SNORA26.5-201ENST00000391215 123 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 RNA5SP482-201ENST00000391269 118 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 AL135790.2-201ENST00000437701 267 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 SNORD127-201ENST00000458892 86 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 SNORA31.10-201ENST00000516482 106 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 AL078604.3-201ENST00000615580 211 ntBASIC1.86□□□□□ -2.11
TRIM60Q495X7 UBE2WP1-201ENST00000362030 340 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 SNORD68-201ENST00000363214 84 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 Y_RNA.193-201ENST00000363979 102 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 Y_RNA.275-201ENST00000364726 110 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 Y_RNA.293-201ENST00000364908 93 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 Y_RNA.352-201ENST00000365439 102 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 Y_RNA.590-201ENST00000410140 107 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 SNORA36B-201ENST00000410438 131 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 RNU2-14P-201ENST00000411053 191 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 Y_RNA.714-201ENST00000517065 90 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 CBX3P4-201ENST00000538909 354 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 AC004817.2-201ENST00000561794 651 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 AC127455.1-201ENST00000565496 145 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 SNORD53B-201ENST00000577887 78 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 AC012433.1-201ENST00000588916 398 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 AC062037.2-201ENST00000610137 73 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 JPX_2.1-201ENST00000614161 69 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.85□□□□□ -2.11
TRIM60Q495X7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRIM60Q495X7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRIM60Q495X7 Y_RNA.14-201ENST00000362415 103 ntBASIC1.84□□□□□ -2.11
TRIM60Q495X7 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
TRIM60Q495X7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM60Q495X7 MLLT10P1-201ENST00000418346 262 ntBASIC1.84□□□□□ -2.11
TRIM60Q495X7 RNU6-740P-201ENST00000364734 105 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 RNU6-60P-201ENST00000364792 103 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.83□□□□□ -2.12
TRIM60Q495X7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM60Q495X7 JTBP1-201ENST00000441314 247 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 RNU6-437P-201ENST00000459408 95 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 MIR5692C2-201ENST00000577959 77 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 MIR2681-201ENST00000581814 105 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 AC013791.1-201ENST00000616619 62 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 AC073349.3-201ENST00000617616 186 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 snoU18.1-201ENST00000629629 71 ntBASIC1.83□□□□□ -2.12
TRIM60Q495X7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRIM60Q495X7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms