Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNU6-1199P-201ENST00000411249 104 ntBASIC0.29□□□□□ -2.36
FOXF1Q12946 RPL7P42-201ENST00000481005 679 ntBASIC0.29□□□□□ -2.36
FOXF1Q12946 RNU6-911P-201ENST00000516523 104 ntBASIC0.29□□□□□ -2.36
FOXF1Q12946 MIR2115-201ENST00000516657 100 ntBASIC0.29□□□□□ -2.36
FOXF1Q12946 RNU7-4P-201ENST00000516961 62 ntBASIC0.29□□□□□ -2.36
FOXF1Q12946 RNU6-94P-201ENST00000607728 107 ntBASIC0.29□□□□□ -2.36
FOXF1Q12946 AC008133.2-201ENST00000624540 351 ntBASIC0.29□□□□□ -2.36
FOXF1Q12946 AC134026.1-201ENST00000623249 2239 ntBASIC0.29□□□□□ -2.36
FOXF1Q12946 AL589743.1-201ENST00000551932 2712 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 Y_RNA.6-201ENST00000362350 114 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 Y_RNA.101-201ENST00000363154 102 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 Y_RNA.118-201ENST00000363300 101 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 Y_RNA.166-201ENST00000363730 102 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 Y_RNA.168-201ENST00000363740 102 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 RNU6-654P-201ENST00000364373 107 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 SNORD50B-201ENST00000364995 70 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 RNU4-45P-201ENST00000365469 141 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 RNU6-1323P-201ENST00000384025 107 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 SNORD116-4-201ENST00000384733 96 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 MT-TN-201ENST00000387400 73 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 SNORD78.2-201ENST00000391076 69 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 SNORD115-47-201ENST00000391226 86 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 RNU6-710P-201ENST00000410424 105 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 RNU6-1304P-201ENST00000411374 106 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 MTND1P34-201ENST00000438556 671 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.28□□□□□ -2.36
FOXF1Q12946 RNU6-436P-201ENST00000516171 114 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 Y_RNA.691-201ENST00000516611 103 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 SNORA18.7-201ENST00000516910 131 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 RNU7-116P-201ENST00000516940 62 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 RNU6-1213P-201ENST00000517075 94 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 AC005176.2-201ENST00000596933 147 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 AC104695.3-201ENST00000604052 296 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 MIR1244-1-201ENST00000612829 85 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 AC087588.2-201ENST00000617667 426 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.28□□□□□ -2.36
FOXF1Q12946 MIR6516-201ENST00000630554 81 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 MIR1244-3-201ENST00000635744 85 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 MIR4251-201ENST00000635819 61 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 MIR1244-2-201ENST00000636449 85 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 MIR1244-4-202ENST00000636813 85 ntBASIC0.28□□□□□ -2.36
FOXF1Q12946 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
FOXF1Q12946 RNU6-1084P-201ENST00000362498 107 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 RNY3P11-201ENST00000364153 102 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 RNU6-99P-201ENST00000364721 107 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 RNU6-926P-201ENST00000384075 107 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 SNORD38C-201ENST00000384381 69 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 MIR570-201ENST00000384917 97 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 SNORD105-201ENST00000386910 85 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 RNU6-192P-201ENST00000391253 100 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 SNORA75.6-201ENST00000391318 127 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 RNU6-994P-201ENST00000410507 111 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 RNU6-177P-201ENST00000411257 104 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 AC015818.7-201ENST00000428754 109 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 AC087499.7-201ENST00000441958 109 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.27□□□□□ -2.37
FOXF1Q12946 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.27□□□□□ -2.37
FOXF1Q12946 snoU13.21-201ENST00000459368 105 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 AC092989.1-201ENST00000481235 277 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.27□□□□□ -2.37
FOXF1Q12946 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.27□□□□□ -2.37
FOXF1Q12946 RNU6-1012P-201ENST00000516606 109 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 AC144568.1-201ENST00000520139 137 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.27□□□□□ -2.37
FOXF1Q12946 AL355375.2-201ENST00000574825 175 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 AC012433.1-201ENST00000588916 398 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 AC022441.3-201ENST00000605737 136 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 PVT1_3.1-201ENST00000620853 95 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 7SK.10-201ENST00000621414 298 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 AL669831.3-213ENST00000636676 183 ntBASIC0.27□□□□□ -2.37
FOXF1Q12946 Y_RNA.146-201ENST00000363549 102 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 RNU6-580P-201ENST00000365159 107 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 Y_RNA.446-201ENST00000384178 104 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 RNU6-1237P-201ENST00000384777 107 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 RNU4-14P-201ENST00000410858 122 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 MCFD2P1-201ENST00000417812 300 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 MLLT10P1-201ENST00000418346 262 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 SNRPGP14-201ENST00000435400 219 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 RNU6-358P-201ENST00000516564 75 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 AP003357.1-201ENST00000604497 148 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 AL355073.2-201ENST00000612106 557 ntBASIC0.26□□□□□ -2.37
FOXF1Q12946 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
FOXF1Q12946 SNORD14E-201ENST00000364009 85 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 Y_RNA.242-201ENST00000364473 110 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 Y_RNA.368-201ENST00000365547 113 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 Y_RNA.376-201ENST00000365638 108 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 RNU6-20P-201ENST00000384106 107 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 RNU6-708P-201ENST00000384217 107 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 Y_RNA.456-201ENST00000384232 111 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 RNU6-1215P-201ENST00000384441 102 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 RNU6-342P-201ENST00000384521 104 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 SNORD28B-201ENST00000390993 75 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 MIR548F1-201ENST00000408667 84 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 RNU6-1156P-201ENST00000410365 100 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 MTND1P2-201ENST00000430604 821 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 FGF7P6-202ENST00000451282 293 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 NDUFA4P2-201ENST00000489989 244 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 AC069439.1-201ENST00000494739 167 ntBASIC0.25□□□□□ -2.37
FOXF1Q12946 PRDX4P1-201ENST00000507189 574 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms