Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 POLR2J4-204ENST00000418424 324 ntBASIC0.96□□□□□ -2.26
SCN1BQ07699 RPL23AP54-201ENST00000495129 419 ntBASIC0.96□□□□□ -2.26
SCN1BQ07699 MIR4764-201ENST00000580680 88 ntBASIC0.96□□□□□ -2.26
SCN1BQ07699 AP003357.1-201ENST00000604497 148 ntBASIC0.96□□□□□ -2.26
SCN1BQ07699 Y_RNA.203-201ENST00000364106 102 ntBASIC0.95□□□□□ -2.26
SCN1BQ07699 Y_RNA.551-201ENST00000384661 102 ntBASIC0.95□□□□□ -2.26
SCN1BQ07699 AP1B1P2-201ENST00000416196 106 ntBASIC0.95□□□□□ -2.26
SCN1BQ07699 AC117454.1-201ENST00000491120 168 ntBASIC0.95□□□□□ -2.26
SCN1BQ07699 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.95□□□□□ -2.26
SCN1BQ07699 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
SCN1BQ07699 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.95□□□□□ -2.26
SCN1BQ07699 MIR4781-201ENST00000585250 76 ntBASIC0.95□□□□□ -2.26
SCN1BQ07699 MIR6078-201ENST00000611069 100 ntBASIC0.95□□□□□ -2.26
SCN1BQ07699 AC006157.1-201ENST00000611750 366 ntBASIC0.95□□□□□ -2.26
SCN1BQ07699 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
SCN1BQ07699 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SCN1BQ07699 Y_RNA.143-201ENST00000363520 106 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 SNORD14E-201ENST00000364009 85 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 RNY1P14-201ENST00000384426 108 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 Y_RNA.579-201ENST00000390939 94 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.94□□□□□ -2.26
SCN1BQ07699 U8.20-201ENST00000459445 131 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 SNORD123-201ENST00000459473 70 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 RNU7-43P-201ENST00000516554 64 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 AC127455.1-201ENST00000565496 145 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 JPX_2.1-201ENST00000614161 69 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 Y_RNA.804-201ENST00000615262 101 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 MIR548AY-201ENST00000617669 107 ntBASIC0.94□□□□□ -2.26
SCN1BQ07699 AL391987.6-201ENST00000305671 199 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 MIR337-201ENST00000362281 93 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 RNA5SP432-201ENST00000362480 116 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 RNA5SP48-201ENST00000363969 126 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 U8.7-201ENST00000364940 136 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 Y_RNA.471-201ENST00000384312 102 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 Y_RNA.526-201ENST00000384572 110 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 RPS3AP1-201ENST00000413190 320 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 Y_RNA.638-201ENST00000459374 113 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 RNU7-115P-201ENST00000516433 55 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 AC040926.1-201ENST00000530195 238 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.93□□□□□ -2.26
SCN1BQ07699 MIR4795-201ENST00000584182 89 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 AP000942.3-201ENST00000603702 160 ntBASIC0.93□□□□□ -2.26
SCN1BQ07699 SNORD63-201ENST00000384262 68 ntBASIC0.92□□□□□ -2.26
SCN1BQ07699 MIR1185-1-201ENST00000408598 86 ntBASIC0.92□□□□□ -2.26
SCN1BQ07699 AC010655.3-201ENST00000478818 450 ntBASIC0.92□□□□□ -2.26
SCN1BQ07699 MTND3P22-201ENST00000510932 243 ntBASIC0.92□□□□□ -2.26
SCN1BQ07699 Y_RNA.713-201ENST00000517013 96 ntBASIC0.92□□□□□ -2.26
SCN1BQ07699 AP003716.2-201ENST00000528260 108 ntBASIC0.92□□□□□ -2.26
SCN1BQ07699 AC023827.1-201ENST00000569247 97 ntBASIC0.92□□□□□ -2.26
SCN1BQ07699 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.92□□□□□ -2.26
SCN1BQ07699 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
SCN1BQ07699 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.91□□□□□ -2.26
SCN1BQ07699 RNU4-73P-201ENST00000363164 141 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 RNU4-50P-201ENST00000364361 141 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 RNY3P14-201ENST00000384309 102 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 MIR802-201ENST00000390235 94 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 HMGN1P10-201ENST00000474557 553 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 AC087343.1-201ENST00000477341 475 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.91□□□□□ -2.26
SCN1BQ07699 RNU6-197P-201ENST00000516680 100 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.91□□□□□ -2.26
SCN1BQ07699 AC007485.1-201ENST00000616755 206 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 SEPT14P17-201ENST00000617978 177 ntBASIC0.91□□□□□ -2.26
SCN1BQ07699 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.91□□□□□ -2.26
SCN1BQ07699 RNU4-80P-201ENST00000363200 141 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 RNU6-1209P-201ENST00000363655 107 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 Y_RNA.197-201ENST00000364004 102 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 RNU6-1048P-201ENST00000364054 107 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 Y_RNA.383-201ENST00000383855 97 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 SNORD38C-201ENST00000384381 69 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 RNU6-130P-201ENST00000411112 103 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 POLR2KP2-201ENST00000438155 177 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 AC092473.1-201ENST00000441098 221 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.9□□□□□ -2.27
SCN1BQ07699 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 RN7SKP164-201ENST00000516138 266 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 AC131055.1-201ENST00000584626 316 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 PART1_1.1-201ENST00000611761 217 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.9□□□□□ -2.27
SCN1BQ07699 AC007742.2-201ENST00000618226 398 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 AC091895.1-201ENST00000624494 256 ntBASIC0.9□□□□□ -2.27
SCN1BQ07699 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SCN1BQ07699 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SCN1BQ07699 Y_RNA.148-201ENST00000363557 117 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 Y_RNA.796-201ENST00000364268 102 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 Y_RNA.813-201ENST00000364639 102 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 Y_RNA.286-201ENST00000364813 102 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 Y_RNA.799-201ENST00000364992 102 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 NDUFA4P2-201ENST00000489989 244 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 AC005840.1-201ENST00000498412 377 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 RNA5SP255-201ENST00000516370 107 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 AC087685.1-201ENST00000587507 141 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 AC008133.2-201ENST00000624540 351 ntBASIC0.89□□□□□ -2.27
SCN1BQ07699 AC134026.1-201ENST00000623249 2239 ntBASIC0.88□□□□□ -2.27
SCN1BQ07699 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms