Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MCCD1P59942 MIR148B-201ENST00000362252 99 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 U8.5-201ENST00000364528 136 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 RNU4-16P-201ENST00000364737 141 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 Y_RNA.440-201ENST00000384120 114 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 SNORA54-201ENST00000384281 123 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 RNU6-1113P-201ENST00000384348 107 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 RNU6-938P-201ENST00000411285 103 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.38□□□□□ -1.87
MCCD1P59942 SNRPGP14-201ENST00000435400 219 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 RNU6-109P-201ENST00000516364 107 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 RNU6-184P-201ENST00000516514 107 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 AC022202.1-201ENST00000613515 211 ntBASIC3.38□□□□□ -1.87
MCCD1P59942 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
MCCD1P59942 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.37□□□□□ -1.87
MCCD1P59942 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MCCD1P59942 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.37□□□□□ -1.87
MCCD1P59942 RNU6-640P-201ENST00000363693 105 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 U8.6-201ENST00000364939 135 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 RNU6-1104P-201ENST00000384723 104 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 RNU6-440P-201ENST00000390882 105 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.37□□□□□ -1.87
MCCD1P59942 SUMO1P4-201ENST00000429430 302 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 RN7SL863P-201ENST00000462370 296 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 AC114811.1-201ENST00000507207 168 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 SNORA40.13-201ENST00000516379 120 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 AC022523.2-201ENST00000561045 150 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 MIR3169-201ENST00000578032 83 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 AC002984.1-201ENST00000591692 448 ntBASIC3.37□□□□□ -1.87
MCCD1P59942 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
MCCD1P59942 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
MCCD1P59942 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
MCCD1P59942 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
MCCD1P59942 SNORD73B-201ENST00000364394 72 ntBASIC3.36□□□□□ -1.87
MCCD1P59942 RNU6-294P-201ENST00000364999 102 ntBASIC3.36□□□□□ -1.87
MCCD1P59942 Y_RNA.336-201ENST00000365307 109 ntBASIC3.36□□□□□ -1.87
MCCD1P59942 SNORA46-201ENST00000384762 135 ntBASIC3.36□□□□□ -1.87
MCCD1P59942 RPL32P35-201ENST00000415214 394 ntBASIC3.36□□□□□ -1.87
MCCD1P59942 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.36□□□□□ -1.87
MCCD1P59942 RNU7-123P-201ENST00000515911 60 ntBASIC3.36□□□□□ -1.87
MCCD1P59942 AC068339.1-201ENST00000526965 141 ntBASIC3.36□□□□□ -1.87
MCCD1P59942 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MCCD1P59942 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
MCCD1P59942 RNU1-91P-201ENST00000364746 163 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 Y_RNA.323-201ENST00000365157 109 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 MIR590-201ENST00000385008 97 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 MIR670-201ENST00000390142 98 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 SNORA11.4-201ENST00000408823 129 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 SNORA19.1-201ENST00000410656 129 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 HMGN2P35-201ENST00000412164 270 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 RNU7-80P-201ENST00000459562 61 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 RN7SL20P-201ENST00000488827 297 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 AC245166.1-201ENST00000521012 253 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 AC141557.1-201ENST00000540982 400 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 MIR5009-201ENST00000578736 100 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.35□□□□□ -1.87
MCCD1P59942 UBL5P2-201ENST00000583788 219 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 AP006437.1-201ENST00000641440 3685 ntBASIC3.35□□□□□ -1.87
MCCD1P59942 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MCCD1P59942 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MCCD1P59942 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
MCCD1P59942 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
MCCD1P59942 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
MCCD1P59942 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.34□□□□□ -1.87
MCCD1P59942 RN7SKP43-201ENST00000516173 320 ntBASIC3.34□□□□□ -1.87
MCCD1P59942 RNU6-970P-201ENST00000516312 107 ntBASIC3.34□□□□□ -1.87
MCCD1P59942 MIR4778-201ENST00000577635 80 ntBASIC3.34□□□□□ -1.87
MCCD1P59942 MIR1254-2-201ENST00000579553 63 ntBASIC3.34□□□□□ -1.87
MCCD1P59942 MIR4305-201ENST00000583252 102 ntBASIC3.34□□□□□ -1.87
MCCD1P59942 RNU6-94P-201ENST00000607728 107 ntBASIC3.34□□□□□ -1.87
MCCD1P59942 MIR8054-201ENST00000620877 86 ntBASIC3.34□□□□□ -1.87
MCCD1P59942 AC091932.4-201ENST00000623386 200 ntBASIC3.34□□□□□ -1.87
MCCD1P59942 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MCCD1P59942 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.87
MCCD1P59942 AC093831.2-201ENST00000624393 3427 ntBASIC3.34□□□□□ -1.88
MCCD1P59942 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
MCCD1P59942 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MCCD1P59942 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
MCCD1P59942 Y_RNA.344-201ENST00000365381 112 ntBASIC3.33□□□□□ -1.88
MCCD1P59942 SNORD38C-201ENST00000384381 69 ntBASIC3.33□□□□□ -1.88
MCCD1P59942 RN7SL504P-201ENST00000494496 287 ntBASIC3.33□□□□□ -1.88
MCCD1P59942 RNU7-28P-201ENST00000516759 62 ntBASIC3.33□□□□□ -1.88
MCCD1P59942 RNU7-6P-201ENST00000516845 62 ntBASIC3.33□□□□□ -1.88
MCCD1P59942 AC026271.5-201ENST00000577873 130 ntBASIC3.33□□□□□ -1.88
MCCD1P59942 MIR5194-201ENST00000582634 120 ntBASIC3.33□□□□□ -1.88
MCCD1P59942 AL161756.2-201ENST00000604597 246 ntBASIC3.33□□□□□ -1.88
MCCD1P59942 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.33□□□□□ -1.88
MCCD1P59942 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.33□□□□□ -1.88
MCCD1P59942 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
MCCD1P59942 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MCCD1P59942 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.32□□□□□ -1.88
MCCD1P59942 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
MCCD1P59942 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MCCD1P59942 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MCCD1P59942 SNORA25.6-201ENST00000364121 118 ntBASIC3.32□□□□□ -1.88
MCCD1P59942 Y_RNA.241-201ENST00000364470 117 ntBASIC3.32□□□□□ -1.88
MCCD1P59942 RNU6-49P-201ENST00000384256 107 ntBASIC3.32□□□□□ -1.88
MCCD1P59942 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.32□□□□□ -1.88
MCCD1P59942 AC024614.2-201ENST00000577584 372 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms