Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MTCO2P12-201ENST00000427426 682 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 AC104332.1-201ENST00000440471 797 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 LINC01399-202ENST00000458450 244 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.62□□□□□ -2.15
RHBDL3P58872 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.62□□□□□ -2.15
RHBDL3P58872 MIR2681-201ENST00000581814 105 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 MIR3660-201ENST00000584845 100 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RHBDL3P58872 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RHBDL3P58872 MTND4P29-201ENST00000503122 1372 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 RNU6-474P-201ENST00000384243 107 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 SNORD41-201ENST00000386967 70 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 MLLT10P1-201ENST00000418346 262 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 RNU1-123P-201ENST00000458950 160 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 RNA5SP61-201ENST00000516453 100 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 RNU6-1007P-201ENST00000516586 107 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 AL160236.1-201ENST00000556317 195 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 MIR4300-201ENST00000581016 96 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 JPX_2.1-201ENST00000614161 69 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 MIR548AY-201ENST00000617669 107 ntBASIC1.61□□□□□ -2.15
RHBDL3P58872 RNU4-90P-201ENST00000362773 141 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 Y_RNA.242-201ENST00000364473 110 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 AL590004.1-201ENST00000405321 300 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 SNRPGP10-201ENST00000432323 225 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 RPL23AP54-201ENST00000495129 419 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 RNU7-115P-201ENST00000516433 55 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 SNORA40.15-201ENST00000516884 107 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 RNU6-165P-201ENST00000517170 99 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 RNU6-1116P-201ENST00000517269 99 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 AC136628.3-201ENST00000521868 290 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 AC127455.1-201ENST00000565496 145 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 FAM106DP-201ENST00000586416 501 ntBASIC1.6□□□□□ -2.15
RHBDL3P58872 RNA5SP327-201ENST00000362494 101 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 SNORD113-8-201ENST00000363497 74 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 Y_RNA.152-201ENST00000363578 100 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 Y_RNA.203-201ENST00000364106 102 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 MIR618-201ENST00000385287 98 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 Y_RNA.645-201ENST00000391229 102 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 RNU6-1054P-201ENST00000411293 104 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 DYNLT3P2-201ENST00000442517 295 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.59□□□□□ -2.15
RHBDL3P58872 AC024405.2-202ENST00000532731 184 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 AC104695.3-201ENST00000604052 296 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 MIR6504-201ENST00000613520 61 ntBASIC1.59□□□□□ -2.15
RHBDL3P58872 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.59□□□□□ -2.15
RHBDL3P58872 AP000648.3-201ENST00000623539 4507 ntBASIC1.59□□□□□ -2.16
RHBDL3P58872 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
RHBDL3P58872 Y_RNA.158-201ENST00000363651 101 ntBASIC1.58□□□□□ -2.16
RHBDL3P58872 Y_RNA.222-201ENST00000364264 102 ntBASIC1.58□□□□□ -2.16
RHBDL3P58872 Y_RNA.336-201ENST00000365307 109 ntBASIC1.58□□□□□ -2.16
RHBDL3P58872 MIR136-201ENST00000385207 82 ntBASIC1.58□□□□□ -2.16
RHBDL3P58872 RNU6-1046P-201ENST00000516538 107 ntBASIC1.58□□□□□ -2.16
RHBDL3P58872 SNORD45.4-201ENST00000516629 73 ntBASIC1.58□□□□□ -2.16
RHBDL3P58872 Y_RNA.711-201ENST00000516993 102 ntBASIC1.58□□□□□ -2.16
RHBDL3P58872 AC136932.1-201ENST00000574771 208 ntBASIC1.58□□□□□ -2.16
RHBDL3P58872 AC037487.3-201ENST00000606668 112 ntBASIC1.58□□□□□ -2.16
RHBDL3P58872 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RHBDL3P58872 SNORD115-46-201ENST00000390982 71 ntBASIC1.57□□□□□ -2.16
RHBDL3P58872 SNORA40.6-201ENST00000391153 128 ntBASIC1.57□□□□□ -2.16
RHBDL3P58872 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.57□□□□□ -2.16
RHBDL3P58872 RNU6-1143P-201ENST00000516125 104 ntBASIC1.57□□□□□ -2.16
RHBDL3P58872 RNU6-397P-201ENST00000516226 104 ntBASIC1.57□□□□□ -2.16
RHBDL3P58872 RNU6-947P-201ENST00000516264 106 ntBASIC1.57□□□□□ -2.16
RHBDL3P58872 RNU6-897P-201ENST00000517135 105 ntBASIC1.57□□□□□ -2.16
RHBDL3P58872 SNORA70.22-201ENST00000517160 124 ntBASIC1.57□□□□□ -2.16
RHBDL3P58872 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.57□□□□□ -2.16
RHBDL3P58872 MIR3145-201ENST00000580727 82 ntBASIC1.57□□□□□ -2.16
RHBDL3P58872 AL355297.3-201ENST00000604082 446 ntBASIC1.57□□□□□ -2.16
RHBDL3P58872 RNU4-80P-201ENST00000363200 141 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 Y_RNA.136-201ENST00000363444 102 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 SNORD14E-201ENST00000364009 85 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 Y_RNA.276-201ENST00000364732 109 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 SNORA25-201ENST00000384384 134 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 MIR222-201ENST00000384992 110 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 MIR1298-201ENST00000408783 112 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.56□□□□□ -2.16
RHBDL3P58872 AC117454.1-201ENST00000491120 168 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 SNORA31.2-201ENST00000516019 134 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 RNU7-40P-201ENST00000516397 64 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 SNORD111.1-201ENST00000516421 86 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 AC008269.2-201ENST00000561915 1105 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 RAC1P9-201ENST00000604990 392 ntBASIC1.56□□□□□ -2.16
RHBDL3P58872 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.56□□□□□ -2.16
RHBDL3P58872 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
RHBDL3P58872 Y_RNA.202-201ENST00000364083 110 ntBASIC1.55□□□□□ -2.16
RHBDL3P58872 RNU6-450P-201ENST00000364654 107 ntBASIC1.55□□□□□ -2.16
RHBDL3P58872 Y_RNA.355-201ENST00000365462 98 ntBASIC1.55□□□□□ -2.16
RHBDL3P58872 SNORA22B-201ENST00000383876 138 ntBASIC1.55□□□□□ -2.16
RHBDL3P58872 SNORA70.7-201ENST00000384159 133 ntBASIC1.55□□□□□ -2.16
RHBDL3P58872 SNORA72.4-201ENST00000384174 132 ntBASIC1.55□□□□□ -2.16
RHBDL3P58872 MIR526A1-201ENST00000384897 85 ntBASIC1.55□□□□□ -2.16
RHBDL3P58872 MIR802-201ENST00000390235 94 ntBASIC1.55□□□□□ -2.16
RHBDL3P58872 AL022345.2-201ENST00000606307 135 ntBASIC1.55□□□□□ -2.16
RHBDL3P58872 Y_RNA.11-201ENST00000362375 109 ntBASIC1.54□□□□□ -2.16
RHBDL3P58872 Y_RNA.286-201ENST00000364813 102 ntBASIC1.54□□□□□ -2.16
RHBDL3P58872 U8.7-201ENST00000364940 136 ntBASIC1.54□□□□□ -2.16
RHBDL3P58872 Y_RNA.455-201ENST00000384230 98 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms