Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL590004.1-201ENST00000405321 300 ntBASIC1.24□□□□□ -2.21
HMGCS2P54868 RN7SKP200-201ENST00000410564 320 ntBASIC1.24□□□□□ -2.21
HMGCS2P54868 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
HMGCS2P54868 OR9P1P-201ENST00000496431 281 ntBASIC1.24□□□□□ -2.21
HMGCS2P54868 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGCS2P54868 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGCS2P54868 SNORD113-5-201ENST00000607261 78 ntBASIC1.24□□□□□ -2.21
HMGCS2P54868 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HMGCS2P54868 Y_RNA.368-201ENST00000365547 113 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 Y_RNA.418-201ENST00000384029 102 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 RNU6-639P-201ENST00000384074 107 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 SNORD26-201ENST00000384147 75 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 RNU6-21P-201ENST00000384710 107 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 MIR215-201ENST00000384858 110 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 MIR7-2-201ENST00000384970 110 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 MIR520G-201ENST00000385064 90 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 Y_RNA.581-201ENST00000391017 97 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 RPL30P13-201ENST00000418873 348 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGCS2P54868 Z98949.2-201ENST00000440996 144 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 STAG3L5P-204ENST00000443759 179 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGCS2P54868 AC079140.2-201ENST00000506193 142 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.23□□□□□ -2.21
HMGCS2P54868 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
HMGCS2P54868 MIR373-201ENST00000362273 69 ntBASIC1.22□□□□□ -2.21
HMGCS2P54868 Y_RNA.19-201ENST00000362462 99 ntBASIC1.22□□□□□ -2.21
HMGCS2P54868 SNORD1A-201ENST00000364968 72 ntBASIC1.22□□□□□ -2.21
HMGCS2P54868 Y_RNA.602-201ENST00000410535 92 ntBASIC1.22□□□□□ -2.21
HMGCS2P54868 RPL21P38-201ENST00000418090 167 ntBASIC1.22□□□□□ -2.21
HMGCS2P54868 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGCS2P54868 RNA5SP480-201ENST00000516840 109 ntBASIC1.22□□□□□ -2.21
HMGCS2P54868 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
HMGCS2P54868 AL358944.1-201ENST00000528537 144 ntBASIC1.22□□□□□ -2.21
HMGCS2P54868 AP002004.2-201ENST00000531656 154 ntBASIC1.22□□□□□ -2.21
HMGCS2P54868 AL160236.1-201ENST00000556317 195 ntBASIC1.22□□□□□ -2.21
HMGCS2P54868 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGCS2P54868 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMGCS2P54868 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGCS2P54868 MIRLET7C-201ENST00000362160 84 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 Y_RNA.64-201ENST00000362845 102 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 RNU4-80P-201ENST00000363200 141 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 Y_RNA.541-201ENST00000384640 113 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 MIR562-201ENST00000384894 95 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 MIR613-201ENST00000385248 95 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 RNU11-5P-201ENST00000391216 129 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 AL034345.1-201ENST00000407768 123 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 RNU6-855P-201ENST00000410395 104 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 RNU6-710P-201ENST00000410424 105 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 CALM2P4-201ENST00000430810 426 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 AC233266.1-201ENST00000454518 96 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 RNU6-191P-201ENST00000516295 94 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGCS2P54868 MIR3937-201ENST00000580135 106 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 AL162424.1-201ENST00000602325 221 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 AC005972.2-201ENST00000604690 348 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 Y_RNA.812-201ENST00000610788 101 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 AC242852.1-201ENST00000612151 96 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 Y_RNA.784-201ENST00000613803 101 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 Y_RNA.787-201ENST00000616522 101 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 Y_RNA.780-201ENST00000617336 101 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 Y_RNA.801-201ENST00000619005 101 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 PVT1_3.1-201ENST00000620853 95 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 AC244015.1-201ENST00000622301 99 ntBASIC1.21□□□□□ -2.22
HMGCS2P54868 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGCS2P54868 MIR26B-201ENST00000362251 77 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 RNU6-1123P-201ENST00000362347 106 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 Y_RNA.136-201ENST00000363444 102 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 RNU6-801P-201ENST00000364087 105 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 RNU4-41P-201ENST00000364426 143 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 SNORA63C-201ENST00000364578 129 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 Y_RNA.341-201ENST00000365341 102 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 RNU6-1323P-201ENST00000384025 107 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 Y_RNA.456-201ENST00000384232 111 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 RNU6-424P-201ENST00000384367 105 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 RNU6-1011P-201ENST00000384668 107 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HMGCS2P54868 U8.16-201ENST00000391279 133 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 POLR2KP2-201ENST00000438155 177 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 PGBD4P5-201ENST00000445958 426 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 AL049830.1-201ENST00000468034 425 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 MRPS35P2-201ENST00000508242 191 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 RNY3P15-201ENST00000516297 97 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 RNA5SP168-201ENST00000516642 112 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 RNU2-56P-201ENST00000516826 190 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 SUMO2P16-201ENST00000519475 264 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 AC073349.3-201ENST00000617616 186 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 AL513423.1-201ENST00000621695 132 ntBASIC1.2□□□□□ -2.22
HMGCS2P54868 Y_RNA.265-201ENST00000364677 108 ntBASIC1.19□□□□□ -2.22
HMGCS2P54868 U8.7-201ENST00000364940 136 ntBASIC1.19□□□□□ -2.22
HMGCS2P54868 RNU6-1065P-201ENST00000384513 106 ntBASIC1.19□□□□□ -2.22
HMGCS2P54868 RNU6-1160P-201ENST00000384546 104 ntBASIC1.19□□□□□ -2.22
HMGCS2P54868 MIR660-201ENST00000385235 97 ntBASIC1.19□□□□□ -2.22
HMGCS2P54868 RNU2-14P-201ENST00000411053 191 ntBASIC1.19□□□□□ -2.22
HMGCS2P54868 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.19□□□□□ -2.22
HMGCS2P54868 AC015922.2-201ENST00000435593 184 ntBASIC1.19□□□□□ -2.22
HMGCS2P54868 AC027119.1-201ENST00000440877 241 ntBASIC1.19□□□□□ -2.22
HMGCS2P54868 SNORA40.15-201ENST00000516884 107 ntBASIC1.19□□□□□ -2.22
HMGCS2P54868 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms