Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC097462.1-201ENST00000514125 324 ntBASIC1.81□□□□□ -2.12
CLCN3P51790 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.81□□□□□ -2.12
CLCN3P51790 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLCN3P51790 RNU6-1048P-201ENST00000364054 107 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 Y_RNA.341-201ENST00000365341 102 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 MIR548I3-201ENST00000408378 149 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 MIR548I1-201ENST00000408810 149 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.8□□□□□ -2.12
CLCN3P51790 RNU7-94P-201ENST00000459576 63 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 RPS27P22-201ENST00000478056 241 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 SNORA31.17-201ENST00000516953 127 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 AC100767.1-201ENST00000528178 123 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 AC015720.1-201ENST00000565251 277 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 MIR5692C2-201ENST00000577959 77 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 AC013791.1-201ENST00000616619 62 ntBASIC1.8□□□□□ -2.12
CLCN3P51790 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.8□□□□□ -2.12
CLCN3P51790 Y_RNA.83-201ENST00000363005 113 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 SNORA33-201ENST00000363664 130 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 Y_RNA.199-201ENST00000364014 102 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 Y_RNA.338-201ENST00000365320 114 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 RNU6-1323P-201ENST00000384025 107 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 RNU6-360P-201ENST00000390944 104 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 BTF3P4-201ENST00000418852 495 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 BTF3P11-201ENST00000426582 477 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 FTH1P12-201ENST00000432137 551 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 AL162725.1-201ENST00000435405 301 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 RNU7-141P-201ENST00000459304 62 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 AL163195.1-201ENST00000496941 348 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 AP003357.1-201ENST00000604497 148 ntBASIC1.79□□□□□ -2.12
CLCN3P51790 MIR378A-201ENST00000362177 66 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 Y_RNA.297-201ENST00000364950 91 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 RNU6-407P-201ENST00000365280 104 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.78□□□□□ -2.12
CLCN3P51790 Y_RNA.435-201ENST00000384095 112 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 RNU6-950P-201ENST00000384651 107 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CLCN3P51790 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 SNORA67.5-201ENST00000391036 107 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 RN7SKP101-201ENST00000411376 320 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 RNU7-115P-201ENST00000516433 55 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 AC027419.1-201ENST00000522976 328 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CLCN3P51790 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.78□□□□□ -2.12
CLCN3P51790 AC091178.2-201ENST00000584401 117 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 AL645939.4-201ENST00000604495 135 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 AL365265.1-201ENST00000621045 234 ntBASIC1.78□□□□□ -2.12
CLCN3P51790 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CLCN3P51790 RNU6-899P-201ENST00000363947 107 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 U8.7-201ENST00000364940 136 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 MIR562-201ENST00000384894 95 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 RNU6-918P-201ENST00000391219 106 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 RNU6-1186P-201ENST00000410429 97 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 RNA5SP511-201ENST00000410487 115 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 RNU2-7P-201ENST00000410794 178 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 Z98949.2-201ENST00000440996 144 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 RNU6-1278P-201ENST00000516130 107 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 Y_RNA.679-201ENST00000516416 91 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 RNU6-63P-201ENST00000516690 95 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 RNU7-172P-201ENST00000517125 64 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 SNORA81.3-201ENST00000517283 198 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 MIR4308-201ENST00000580634 81 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 Z83818.1-201ENST00000603584 150 ntBASIC1.77□□□□□ -2.13
CLCN3P51790 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CLCN3P51790 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CLCN3P51790 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
CLCN3P51790 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 HSPE1P9-201ENST00000440046 311 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 Y_RNA.644-201ENST00000459006 113 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 RNU7-120P-201ENST00000459334 63 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 Y_RNA.674-201ENST00000516362 113 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 SNORA44.1-201ENST00000517031 108 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 RNA5SP437-201ENST00000517249 129 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 AC127455.1-201ENST00000565496 145 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 MIR5688-201ENST00000580619 83 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 AC005972.2-201ENST00000604690 348 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 AC103810.8-201ENST00000607347 118 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 MIR548AY-201ENST00000617669 107 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 FTX_2.1-201ENST00000618816 94 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 AC134026.1-201ENST00000623249 2239 ntBASIC1.76□□□□□ -2.13
CLCN3P51790 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CLCN3P51790 AC018630.2-201ENST00000534866 2403 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLCN3P51790 Y_RNA.29-201ENST00000362570 113 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 RNU1-42P-201ENST00000364033 160 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 RNU6-47P-201ENST00000383866 107 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 MIR526A2-201ENST00000390198 65 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CLCN3P51790 PCNPP3-201ENST00000393579 471 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 MIR1278-201ENST00000408753 81 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 RPS4XP11-201ENST00000446897 772 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 RPS27P1-201ENST00000450552 247 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 AC024405.2-202ENST00000532731 184 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 MIR4498-201ENST00000577599 66 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 SNORD53B-201ENST00000577887 78 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 AC098479.1-201ENST00000609225 154 ntBASIC1.75□□□□□ -2.13
CLCN3P51790 AC004792.1-201ENST00000614523 137 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms