Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC005592.1-201ENST00000566527 1640 ntBASIC1□□□□□ -2.25
GPC3P51654 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.99□□□□□ -2.25
GPC3P51654 Y_RNA.58-201ENST00000362807 102 ntBASIC0.99□□□□□ -2.25
GPC3P51654 Y_RNA.154-201ENST00000363624 102 ntBASIC0.99□□□□□ -2.25
GPC3P51654 U8.5-201ENST00000364528 136 ntBASIC0.99□□□□□ -2.25
GPC3P51654 RNY3P1-201ENST00000365085 102 ntBASIC0.99□□□□□ -2.25
GPC3P51654 RNY3-201ENST00000365484 102 ntBASIC0.99□□□□□ -2.25
GPC3P51654 SNORA63.7-201ENST00000365579 123 ntBASIC0.99□□□□□ -2.25
GPC3P51654 RNU6-42P-201ENST00000384165 107 ntBASIC0.99□□□□□ -2.25
GPC3P51654 RNU6-708P-201ENST00000384217 107 ntBASIC0.99□□□□□ -2.25
GPC3P51654 Y_RNA.456-201ENST00000384232 111 ntBASIC0.99□□□□□ -2.25
GPC3P51654 Y_RNA.458-201ENST00000384240 102 ntBASIC0.99□□□□□ -2.25
GPC3P51654 Y_RNA.471-201ENST00000384312 102 ntBASIC0.99□□□□□ -2.25
GPC3P51654 RNU6-163P-201ENST00000384396 106 ntBASIC0.99□□□□□ -2.25
GPC3P51654 Y_RNA.496-201ENST00000384444 101 ntBASIC0.99□□□□□ -2.25
GPC3P51654 MIR1302-11-201ENST00000408051 138 ntBASIC0.99□□□□□ -2.25
GPC3P51654 MIR1302-9-201ENST00000408365 138 ntBASIC0.99□□□□□ -2.25
GPC3P51654 MIR1302-10-201ENST00000408734 138 ntBASIC0.99□□□□□ -2.25
GPC3P51654 Z98949.2-201ENST00000440996 144 ntBASIC0.99□□□□□ -2.25
GPC3P51654 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.99□□□□□ -2.25
GPC3P51654 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
GPC3P51654 MIR4762-201ENST00000585261 75 ntBASIC0.99□□□□□ -2.25
GPC3P51654 AL117336.2-201ENST00000602435 335 ntBASIC0.99□□□□□ -2.25
GPC3P51654 AC120024.3-201ENST00000603167 156 ntBASIC0.99□□□□□ -2.25
GPC3P51654 AL080274.1-201ENST00000605565 220 ntBASIC0.99□□□□□ -2.25
GPC3P51654 MIR1302-2-201ENST00000607096 138 ntBASIC0.99□□□□□ -2.25
GPC3P51654 AC006157.1-201ENST00000611750 366 ntBASIC0.99□□□□□ -2.25
GPC3P51654 AC007742.2-201ENST00000618226 398 ntBASIC0.99□□□□□ -2.25
GPC3P51654 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
GPC3P51654 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
GPC3P51654 MIRLET7C-201ENST00000362160 84 ntBASIC0.98□□□□□ -2.25
GPC3P51654 Y_RNA.331-201ENST00000365267 102 ntBASIC0.98□□□□□ -2.25
GPC3P51654 SNORD14.1-201ENST00000365609 90 ntBASIC0.98□□□□□ -2.25
GPC3P51654 Y_RNA.395-201ENST00000383945 109 ntBASIC0.98□□□□□ -2.25
GPC3P51654 RNU6-1323P-201ENST00000384025 107 ntBASIC0.98□□□□□ -2.25
GPC3P51654 Y_RNA.424-201ENST00000384063 103 ntBASIC0.98□□□□□ -2.25
GPC3P51654 RNU6-21P-201ENST00000384710 107 ntBASIC0.98□□□□□ -2.25
GPC3P51654 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
GPC3P51654 MIR452-201ENST00000385020 85 ntBASIC0.98□□□□□ -2.25
GPC3P51654 Y_RNA.579-201ENST00000390939 94 ntBASIC0.98□□□□□ -2.25
GPC3P51654 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.98□□□□□ -2.25
GPC3P51654 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
GPC3P51654 RNU7-110P-201ENST00000516891 62 ntBASIC0.98□□□□□ -2.25
GPC3P51654 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
GPC3P51654 AC004832.4-201ENST00000608952 331 ntBASIC0.98□□□□□ -2.25
GPC3P51654 AC022709.1-201ENST00000615967 87 ntBASIC0.98□□□□□ -2.25
GPC3P51654 MIR6734-201ENST00000621166 68 ntBASIC0.98□□□□□ -2.25
GPC3P51654 SNORD68-201ENST00000363214 84 ntBASIC0.97□□□□□ -2.25
GPC3P51654 Y_RNA.329-201ENST00000365209 107 ntBASIC0.97□□□□□ -2.25
GPC3P51654 SNORA80D-201ENST00000384488 135 ntBASIC0.97□□□□□ -2.25
GPC3P51654 MIR15B-201ENST00000385045 98 ntBASIC0.97□□□□□ -2.25
GPC3P51654 RNU6-855P-201ENST00000410395 104 ntBASIC0.97□□□□□ -2.25
GPC3P51654 HMGN2P32-201ENST00000444648 269 ntBASIC0.97□□□□□ -2.25
GPC3P51654 RPS20P10-201ENST00000451209 253 ntBASIC0.97□□□□□ -2.25
GPC3P51654 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
GPC3P51654 AC104985.2-201ENST00000620598 500 ntBASIC0.97□□□□□ -2.25
GPC3P51654 AC090971.5-201ENST00000621102 293 ntBASIC0.97□□□□□ -2.25
GPC3P51654 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
GPC3P51654 Y_RNA.341-201ENST00000365341 102 ntBASIC0.96□□□□□ -2.26
GPC3P51654 Y_RNA.368-201ENST00000365547 113 ntBASIC0.96□□□□□ -2.26
GPC3P51654 SNORD116-13-201ENST00000384408 92 ntBASIC0.96□□□□□ -2.26
GPC3P51654 Y_RNA.551-201ENST00000384661 102 ntBASIC0.96□□□□□ -2.26
GPC3P51654 LINC01399-202ENST00000458450 244 ntBASIC0.96□□□□□ -2.26
GPC3P51654 SEPT14P8-201ENST00000508026 178 ntBASIC0.96□□□□□ -2.26
GPC3P51654 SNORA25.10-201ENST00000515926 124 ntBASIC0.96□□□□□ -2.26
GPC3P51654 SNORD79.1-201ENST00000516069 84 ntBASIC0.96□□□□□ -2.26
GPC3P51654 RNU6-1223P-201ENST00000517124 104 ntBASIC0.96□□□□□ -2.26
GPC3P51654 AC040926.1-201ENST00000530195 238 ntBASIC0.96□□□□□ -2.26
GPC3P51654 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
GPC3P51654 Y_RNA.80-201ENST00000362996 102 ntBASIC0.95□□□□□ -2.26
GPC3P51654 RNU1-36P-201ENST00000365130 165 ntBASIC0.95□□□□□ -2.26
GPC3P51654 SNORD41-201ENST00000386967 70 ntBASIC0.95□□□□□ -2.26
GPC3P51654 RNU2-64P-201ENST00000411315 191 ntBASIC0.95□□□□□ -2.26
GPC3P51654 AC002429.1-201ENST00000437672 148 ntBASIC0.95□□□□□ -2.26
GPC3P51654 PDCD5P2-201ENST00000507570 312 ntBASIC0.95□□□□□ -2.26
GPC3P51654 Y_RNA.721-201ENST00000517207 102 ntBASIC0.95□□□□□ -2.26
GPC3P51654 FAM71BP1-201ENST00000604431 523 ntBASIC0.95□□□□□ -2.26
GPC3P51654 SNORD113-5-201ENST00000607261 78 ntBASIC0.95□□□□□ -2.26
GPC3P51654 SNORD58B-201ENST00000607313 66 ntBASIC0.95□□□□□ -2.26
GPC3P51654 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.95□□□□□ -2.26
GPC3P51654 AL591926.4-201ENST00000616895 298 ntBASIC0.95□□□□□ -2.26
GPC3P51654 RNU6-1084P-201ENST00000362498 107 ntBASIC0.94□□□□□ -2.26
GPC3P51654 Y_RNA.242-201ENST00000364473 110 ntBASIC0.94□□□□□ -2.26
GPC3P51654 snoU2-30.1-201ENST00000365012 70 ntBASIC0.94□□□□□ -2.26
GPC3P51654 Y_RNA.354-201ENST00000365448 111 ntBASIC0.94□□□□□ -2.26
GPC3P51654 Y_RNA.460-201ENST00000384255 102 ntBASIC0.94□□□□□ -2.26
GPC3P51654 RNU6-131P-201ENST00000391144 107 ntBASIC0.94□□□□□ -2.26
GPC3P51654 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.94□□□□□ -2.26
GPC3P51654 RPEP5-201ENST00000441137 268 ntBASIC0.94□□□□□ -2.26
GPC3P51654 AC093850.1-201ENST00000454121 251 ntBASIC0.94□□□□□ -2.26
GPC3P51654 Y_RNA.639-201ENST00000458981 102 ntBASIC0.94□□□□□ -2.26
GPC3P51654 RNU6-917P-201ENST00000516294 104 ntBASIC0.94□□□□□ -2.26
GPC3P51654 RNU6-1007P-201ENST00000516586 107 ntBASIC0.94□□□□□ -2.26
GPC3P51654 CYP3A137P-201ENST00000562436 69 ntBASIC0.94□□□□□ -2.26
GPC3P51654 AC087685.1-201ENST00000587507 141 ntBASIC0.94□□□□□ -2.26
GPC3P51654 uc_338.22-201ENST00000622722 187 ntBASIC0.94□□□□□ -2.26
GPC3P51654 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
GPC3P51654 Y_RNA.253-201ENST00000364562 112 ntBASIC0.93□□□□□ -2.26
GPC3P51654 AC104332.1-201ENST00000440471 797 ntBASIC0.93□□□□□ -2.26
GPC3P51654 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms