Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 RNU6-383P-201ENST00000410864 94 ntBASIC1.83□□□□□ -2.12
PDLIM4P50479 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.83□□□□□ -2.12
PDLIM4P50479 RNU7-94P-201ENST00000459576 63 ntBASIC1.83□□□□□ -2.12
PDLIM4P50479 RNU6-1041P-201ENST00000516254 102 ntBASIC1.83□□□□□ -2.12
PDLIM4P50479 RNU6-453P-201ENST00000516819 85 ntBASIC1.83□□□□□ -2.12
PDLIM4P50479 RNU6-341P-201ENST00000516973 96 ntBASIC1.83□□□□□ -2.12
PDLIM4P50479 RNU6-789P-201ENST00000517105 102 ntBASIC1.83□□□□□ -2.12
PDLIM4P50479 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.83□□□□□ -2.12
PDLIM4P50479 AC011604.1-201ENST00000545978 196 ntBASIC1.83□□□□□ -2.12
PDLIM4P50479 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.83□□□□□ -2.12
PDLIM4P50479 AC005786.1-201ENST00000588553 154 ntBASIC1.83□□□□□ -2.12
PDLIM4P50479 AL031274.2-201ENST00000599419 203 ntBASIC1.83□□□□□ -2.12
PDLIM4P50479 MTND1P7-201ENST00000632801 297 ntBASIC1.83□□□□□ -2.12
PDLIM4P50479 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
PDLIM4P50479 RNU1-58P-201ENST00000362413 163 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 RNU6-23P-201ENST00000363283 107 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 Y_RNA.357-201ENST00000365487 109 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 RNU6-804P-201ENST00000384286 107 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 AL606845.1-201ENST00000404881 255 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 RNA5SP338-201ENST00000410495 85 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.82□□□□□ -2.12
PDLIM4P50479 SEPT7P4-201ENST00000437076 306 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PDLIM4P50479 MTND2P29-201ENST00000438595 412 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.82□□□□□ -2.12
PDLIM4P50479 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.82□□□□□ -2.12
PDLIM4P50479 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.82□□□□□ -2.12
PDLIM4P50479 MIR3133-201ENST00000583157 78 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 AC073413.2-201ENST00000604332 360 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 AC022202.1-201ENST00000613515 211 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 AC022513.1-201ENST00000624512 117 ntBASIC1.82□□□□□ -2.12
PDLIM4P50479 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
PDLIM4P50479 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PDLIM4P50479 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
PDLIM4P50479 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
PDLIM4P50479 RNA5SP138-201ENST00000365098 114 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 RNU6-728P-201ENST00000365375 104 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 RNA5SP467-201ENST00000391274 118 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 AL591806.2-201ENST00000433122 173 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 AC099677.2-201ENST00000436385 175 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 AC245047.8-201ENST00000456455 284 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 RNU6-717P-201ENST00000459076 104 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 RNU1-142P-201ENST00000516682 145 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 RNU7-193P-201ENST00000516723 65 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 RNU6-1096P-201ENST00000517089 102 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.81□□□□□ -2.12
PDLIM4P50479 AC015712.3-201ENST00000559380 164 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 AC078899.2-201ENST00000595282 212 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 AL929325.1-201ENST00000603096 117 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 MIR6079-201ENST00000635807 62 ntBASIC1.81□□□□□ -2.12
PDLIM4P50479 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PDLIM4P50479 Y_RNA.796-201ENST00000364268 102 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 SNORA16B-201ENST00000364674 135 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 Y_RNA.799-201ENST00000364992 102 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 RNU6-449P-201ENST00000383914 107 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 Y_RNA.398-201ENST00000383952 99 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 SNORA67.3-201ENST00000384366 140 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 MT-TT-201ENST00000387460 66 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 SNORD11-201ENST00000459124 84 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM4P50479 AC107027.2-201ENST00000512197 115 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 RNU6-1007P-201ENST00000516586 107 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 MTND5P41-201ENST00000517498 206 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM4P50479 AC104465.1-201ENST00000611365 139 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM4P50479 AC245060.5-201ENST00000610778 3293 ntBASIC1.8□□□□□ -2.12
PDLIM4P50479 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
PDLIM4P50479 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PDLIM4P50479 RNU4-41P-201ENST00000364426 143 ntBASIC1.79□□□□□ -2.12
PDLIM4P50479 MIR613-201ENST00000385248 95 ntBASIC1.79□□□□□ -2.12
PDLIM4P50479 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
PDLIM4P50479 RNU6-1186P-201ENST00000410429 97 ntBASIC1.79□□□□□ -2.12
PDLIM4P50479 SNRPGP8-201ENST00000454064 226 ntBASIC1.79□□□□□ -2.12
PDLIM4P50479 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.79□□□□□ -2.12
PDLIM4P50479 RNU6-126P-201ENST00000516685 103 ntBASIC1.79□□□□□ -2.12
PDLIM4P50479 AC097639.2-201ENST00000603159 172 ntBASIC1.79□□□□□ -2.12
PDLIM4P50479 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
PDLIM4P50479 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PDLIM4P50479 RNU6-862P-201ENST00000362804 105 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 RNU6-1209P-201ENST00000363655 107 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 Y_RNA.337-201ENST00000365312 102 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 SNORD113-1-201ENST00000365321 69 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 RNU6-1138P-201ENST00000365359 106 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 Y_RNA.400-201ENST00000383963 111 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 RNU6-643P-201ENST00000384018 107 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 RNU6-136P-201ENST00000384663 107 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 MIR15B-201ENST00000385045 98 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 RNA5SP465-201ENST00000391195 109 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 SNORD77.4-201ENST00000516158 81 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 RNA5SP153-201ENST00000516498 76 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 RNU6-548P-201ENST00000517083 115 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 uc_338.4-201ENST00000616635 176 ntBASIC1.78□□□□□ -2.12
PDLIM4P50479 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PDLIM4P50479 Y_RNA.8-201ENST00000362353 102 ntBASIC1.77□□□□□ -2.13
PDLIM4P50479 RNU6-774P-201ENST00000363238 107 ntBASIC1.77□□□□□ -2.13
PDLIM4P50479 SNORA33-201ENST00000363664 130 ntBASIC1.77□□□□□ -2.13
PDLIM4P50479 RNU6-704P-201ENST00000364162 103 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms