Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNU6-1023P-201ENST00000516137 106 ntBASIC1.52□□□□□ -2.17
HNF4AP41235 AC019176.1-201ENST00000518519 225 ntBASIC1.52□□□□□ -2.17
HNF4AP41235 AC024995.1-201ENST00000523014 93 ntBASIC1.52□□□□□ -2.17
HNF4AP41235 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.52□□□□□ -2.17
HNF4AP41235 AC104984.5-201ENST00000586878 94 ntBASIC1.52□□□□□ -2.17
HNF4AP41235 SNORD26-201ENST00000384147 75 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 SNORA72.4-201ENST00000384174 132 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 RNU6-376P-201ENST00000384731 106 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 RNA5SP323-201ENST00000391094 133 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 MIR548H3-201ENST00000408771 118 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 RN7SKP51-201ENST00000410781 304 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 RPL30P13-201ENST00000418873 348 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 AC104332.1-201ENST00000440471 797 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 RPS26P45-201ENST00000471748 340 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 RNU6-111P-201ENST00000517179 105 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 AC015712.3-201ENST00000559380 164 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 AC091178.2-201ENST00000584401 117 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 AC005972.2-201ENST00000604690 348 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 BX248123.2-201ENST00000606318 124 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 AL008718.3-201ENST00000610217 321 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 AC068647.2-201ENST00000637380 353 ntBASIC1.51□□□□□ -2.17
HNF4AP41235 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HNF4AP41235 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
HNF4AP41235 RNU6-1272P-201ENST00000362776 107 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 Y_RNA.65-201ENST00000362846 100 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 RNA5SP99-201ENST00000364020 114 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 Y_RNA.269-201ENST00000364685 89 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 SNORA20.1-201ENST00000364790 130 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 RNU6-203P-201ENST00000384038 104 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 SNORD58.1-201ENST00000391313 66 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 RPS4XP11-201ENST00000446897 772 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 RPS27P1-201ENST00000450552 247 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 RNU7-141P-201ENST00000459304 62 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 AC091021.1-201ENST00000468051 388 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 AC117454.1-201ENST00000491120 168 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 RNU6-1278P-201ENST00000516130 107 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 AL162424.1-201ENST00000602325 221 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 AC022217.4-201ENST00000604389 163 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 AL078604.3-201ENST00000615580 211 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.5□□□□□ -2.17
HNF4AP41235 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
HNF4AP41235 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.82-201ENST00000363000 102 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.92-201ENST00000363043 102 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.235-201ENST00000364412 102 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.306-201ENST00000365015 102 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.312-201ENST00000365089 102 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.322-201ENST00000365151 102 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 RNU6-211P-201ENST00000384047 107 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.478-201ENST00000384358 107 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 RNU6-950P-201ENST00000384651 107 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 MIR194-1-201ENST00000384892 85 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 MIR517C-201ENST00000385103 95 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 RNA5SP109-201ENST00000391010 116 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 MTCO2P33-201ENST00000402100 465 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 BTF3P11-201ENST00000426582 477 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 snoU13.23-201ENST00000458863 104 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.650-201ENST00000459002 102 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 RNU7-34P-201ENST00000459394 64 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 RNU7-115P-201ENST00000516433 55 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.777-201ENST00000516982 102 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 RNU6-388P-201ENST00000517012 105 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 RNU6-389P-201ENST00000517048 105 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 MIR4282-201ENST00000583613 67 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.771-201ENST00000598668 102 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 AC011921.3-201ENST00000605540 361 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 BX284668.6-201ENST00000606899 438 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 Y_RNA.789-201ENST00000622480 102 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 MIR6079-201ENST00000635807 62 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 AC018630.2-201ENST00000534866 2403 ntBASIC1.49□□□□□ -2.17
HNF4AP41235 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
HNF4AP41235 RNU6-1323P-201ENST00000384025 107 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 Y_RNA.476-201ENST00000384347 108 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 Y_RNA.489-201ENST00000384410 101 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 AC010154.1-201ENST00000425857 269 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 SNORD2.1-201ENST00000458762 69 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 RPL30P7-201ENST00000479312 323 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 SNORD116-28-201ENST00000516123 91 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 RNU6-1096P-201ENST00000517089 102 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 AC024405.2-202ENST00000532731 184 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 POLR3GP1-201ENST00000594073 261 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 AP003357.1-201ENST00000604497 148 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 AC013791.1-201ENST00000616619 62 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 AC078938.1-201ENST00000620993 318 ntBASIC1.48□□□□□ -2.17
HNF4AP41235 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HNF4AP41235 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
HNF4AP41235 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HNF4AP41235 RNU4-13P-201ENST00000364019 141 ntBASIC1.47□□□□□ -2.17
HNF4AP41235 RNU1-42P-201ENST00000364033 160 ntBASIC1.47□□□□□ -2.17
HNF4AP41235 SNORA4.2-201ENST00000365313 147 ntBASIC1.47□□□□□ -2.17
HNF4AP41235 Y_RNA.590-201ENST00000410140 107 ntBASIC1.47□□□□□ -2.17
HNF4AP41235 AC004965.1-201ENST00000413033 213 ntBASIC1.47□□□□□ -2.17
HNF4AP41235 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.47□□□□□ -2.17
HNF4AP41235 RNU6-1291P-201ENST00000516591 104 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms