Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.36□□□□□ -2.19
SOX3P41225 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
SOX3P41225 AC073349.3-201ENST00000617616 186 ntBASIC1.36□□□□□ -2.19
SOX3P41225 AL513423.1-201ENST00000621695 132 ntBASIC1.36□□□□□ -2.19
SOX3P41225 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.36□□□□□ -2.19
SOX3P41225 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.36□□□□□ -2.19
SOX3P41225 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SOX3P41225 MIR302D-201ENST00000362275 68 ntBASIC1.35□□□□□ -2.19
SOX3P41225 Y_RNA.193-201ENST00000363979 102 ntBASIC1.35□□□□□ -2.19
SOX3P41225 RNU6-1048P-201ENST00000364054 107 ntBASIC1.35□□□□□ -2.19
SOX3P41225 RNU4-41P-201ENST00000364426 143 ntBASIC1.35□□□□□ -2.19
SOX3P41225 Y_RNA.237-201ENST00000364439 102 ntBASIC1.35□□□□□ -2.19
SOX3P41225 U8.7-201ENST00000364940 136 ntBASIC1.35□□□□□ -2.19
SOX3P41225 RNU6-338P-201ENST00000383888 105 ntBASIC1.35□□□□□ -2.19
SOX3P41225 RNU6-1080P-201ENST00000383982 107 ntBASIC1.35□□□□□ -2.19
SOX3P41225 RNU6-651P-201ENST00000411040 105 ntBASIC1.35□□□□□ -2.19
SOX3P41225 U8.19-201ENST00000459095 133 ntBASIC1.35□□□□□ -2.19
SOX3P41225 RNU6-1338P-201ENST00000516328 91 ntBASIC1.35□□□□□ -2.19
SOX3P41225 RNU7-115P-201ENST00000516433 55 ntBASIC1.35□□□□□ -2.19
SOX3P41225 Y_RNA.680-201ENST00000516441 93 ntBASIC1.35□□□□□ -2.19
SOX3P41225 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
SOX3P41225 DEFB108E-201ENST00000524692 240 ntBASIC1.35□□□□□ -2.19
SOX3P41225 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.35□□□□□ -2.19
SOX3P41225 AC015688.6-201ENST00000577737 104 ntBASIC1.35□□□□□ -2.19
SOX3P41225 POLR3GP1-201ENST00000594073 261 ntBASIC1.35□□□□□ -2.19
SOX3P41225 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.35□□□□□ -2.19
SOX3P41225 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SOX3P41225 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
SOX3P41225 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
SOX3P41225 ICE2P2-201ENST00000483823 2787 ntBASIC1.34□□□□□ -2.19
SOX3P41225 Y_RNA.176-201ENST00000363815 109 ntBASIC1.34□□□□□ -2.19
SOX3P41225 SNORD1A-201ENST00000364968 72 ntBASIC1.34□□□□□ -2.19
SOX3P41225 SNORA72.4-201ENST00000384174 132 ntBASIC1.34□□□□□ -2.19
SOX3P41225 Y_RNA.461-201ENST00000384263 103 ntBASIC1.34□□□□□ -2.19
SOX3P41225 RNU1-78P-201ENST00000391248 165 ntBASIC1.34□□□□□ -2.19
SOX3P41225 RPL30P13-201ENST00000418873 348 ntBASIC1.34□□□□□ -2.19
SOX3P41225 AC104332.1-201ENST00000440471 797 ntBASIC1.34□□□□□ -2.19
SOX3P41225 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
SOX3P41225 RNA5SP168-201ENST00000516642 112 ntBASIC1.34□□□□□ -2.19
SOX3P41225 SCARNA24.2-201ENST00000516968 130 ntBASIC1.34□□□□□ -2.19
SOX3P41225 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
SOX3P41225 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.34□□□□□ -2.19
SOX3P41225 AC024405.2-202ENST00000532731 184 ntBASIC1.34□□□□□ -2.19
SOX3P41225 MIR4643-201ENST00000577473 78 ntBASIC1.34□□□□□ -2.19
SOX3P41225 AL512605.2-201ENST00000592972 256 ntBASIC1.34□□□□□ -2.19
SOX3P41225 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.34□□□□□ -2.19
SOX3P41225 AC037487.3-201ENST00000606668 112 ntBASIC1.34□□□□□ -2.19
SOX3P41225 AL078604.3-201ENST00000615580 211 ntBASIC1.34□□□□□ -2.19
SOX3P41225 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.34□□□□□ -2.19
SOX3P41225 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SOX3P41225 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.2
SOX3P41225 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
SOX3P41225 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SOX3P41225 MIRLET7C-201ENST00000362160 84 ntBASIC1.33□□□□□ -2.2
SOX3P41225 Y_RNA.338-201ENST00000365320 114 ntBASIC1.33□□□□□ -2.2
SOX3P41225 RNU6-424P-201ENST00000384367 105 ntBASIC1.33□□□□□ -2.2
SOX3P41225 Y_RNA.518-201ENST00000384552 113 ntBASIC1.33□□□□□ -2.2
SOX3P41225 RNU6-713P-201ENST00000384761 107 ntBASIC1.33□□□□□ -2.2
SOX3P41225 SNORA26.5-201ENST00000391215 123 ntBASIC1.33□□□□□ -2.2
SOX3P41225 RNU2-38P-201ENST00000410856 79 ntBASIC1.33□□□□□ -2.2
SOX3P41225 Y_RNA.621-201ENST00000411065 96 ntBASIC1.33□□□□□ -2.2
SOX3P41225 HSPE1P24-201ENST00000450782 238 ntBASIC1.33□□□□□ -2.2
SOX3P41225 TRBVB-201ENST00000477100 408 ntBASIC1.33□□□□□ -2.2
SOX3P41225 AC117454.1-201ENST00000491120 168 ntBASIC1.33□□□□□ -2.2
SOX3P41225 SERF1AP1-201ENST00000514575 187 ntBASIC1.33□□□□□ -2.2
SOX3P41225 Y_RNA.668-201ENST00000516233 93 ntBASIC1.33□□□□□ -2.2
SOX3P41225 SNORA27.4-201ENST00000516650 95 ntBASIC1.33□□□□□ -2.2
SOX3P41225 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.33□□□□□ -2.2
SOX3P41225 snoU13.31-201ENST00000607291 104 ntBASIC1.33□□□□□ -2.2
SOX3P41225 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
SOX3P41225 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SOX3P41225 SNORA25.1-201ENST00000362326 128 ntBASIC1.32□□□□□ -2.2
SOX3P41225 Y_RNA.149-201ENST00000363558 117 ntBASIC1.32□□□□□ -2.2
SOX3P41225 MIR660-201ENST00000385235 97 ntBASIC1.32□□□□□ -2.2
SOX3P41225 U8.16-201ENST00000391279 133 ntBASIC1.32□□□□□ -2.2
SOX3P41225 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
SOX3P41225 CALM2P4-201ENST00000430810 426 ntBASIC1.32□□□□□ -2.2
SOX3P41225 AC009474.2-201ENST00000451383 136 ntBASIC1.32□□□□□ -2.2
SOX3P41225 RNU7-141P-201ENST00000459304 62 ntBASIC1.32□□□□□ -2.2
SOX3P41225 AC091959.1-201ENST00000495857 238 ntBASIC1.32□□□□□ -2.2
SOX3P41225 AC108729.3-201ENST00000513484 108 ntBASIC1.32□□□□□ -2.2
SOX3P41225 SUMO2P16-201ENST00000519475 264 ntBASIC1.32□□□□□ -2.2
SOX3P41225 AC127455.1-201ENST00000565496 145 ntBASIC1.32□□□□□ -2.2
SOX3P41225 MIR4498-201ENST00000577599 66 ntBASIC1.32□□□□□ -2.2
SOX3P41225 MIR4762-201ENST00000585261 75 ntBASIC1.32□□□□□ -2.2
SOX3P41225 AC012433.1-201ENST00000588916 398 ntBASIC1.32□□□□□ -2.2
SOX3P41225 AL591926.4-201ENST00000616895 298 ntBASIC1.32□□□□□ -2.2
SOX3P41225 MIR548AY-201ENST00000617669 107 ntBASIC1.32□□□□□ -2.2
SOX3P41225 SNORD3E-202ENST00000627253 216 ntBASIC1.32□□□□□ -2.2
SOX3P41225 SNORD33-201ENST00000362761 85 ntBASIC1.31□□□□□ -2.2
SOX3P41225 Y_RNA.144-201ENST00000363521 113 ntBASIC1.31□□□□□ -2.2
SOX3P41225 RNU6-662P-201ENST00000384253 104 ntBASIC1.31□□□□□ -2.2
SOX3P41225 MIR513A1-201ENST00000385138 129 ntBASIC1.31□□□□□ -2.2
SOX3P41225 MIR1302-6-201ENST00000408466 90 ntBASIC1.31□□□□□ -2.2
SOX3P41225 RN7SKP51-201ENST00000410781 304 ntBASIC1.31□□□□□ -2.2
SOX3P41225 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
SOX3P41225 SNORD127-201ENST00000458892 86 ntBASIC1.31□□□□□ -2.2
SOX3P41225 Y_RNA.637-201ENST00000459424 114 ntBASIC1.31□□□□□ -2.2
SOX3P41225 MIR4422-201ENST00000581938 83 ntBASIC1.31□□□□□ -2.2
SOX3P41225 MIR8063-201ENST00000621930 81 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms