Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RNU6-502P-201ENST00000362419 108 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 RNU6-268P-201ENST00000364174 107 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 RNU6-24P-201ENST00000384440 107 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 SNORD73A-201ENST00000386062 65 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 U8.15-201ENST00000390947 134 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.46□□□□□ -2.64
SNCAP37840 AL008987.1-201ENST00000415528 237 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 AC073464.1-201ENST00000429823 534 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 HMGN1P33-201ENST00000432945 451 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 SCARNA18B-201ENST00000458806 135 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 RNA5SP484-201ENST00000458857 111 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.46□□□□□ -2.64
SNCAP37840 AC013244.3-201ENST00000605614 388 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 AC087588.2-201ENST00000617667 426 ntBASIC-1.46□□□□□ -2.64
SNCAP37840 MTND5P18-201ENST00000445624 1801 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 SNORA63.5-201ENST00000363548 123 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 SNORD14E-201ENST00000364009 85 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
SNCAP37840 SNORD70.1-201ENST00000391007 85 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 AC244505.6-201ENST00000452829 130 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.47□□□□□ -2.64
SNCAP37840 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.47□□□□□ -2.64
SNCAP37840 AL360085.1-201ENST00000604713 532 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 AL391834.2-201ENST00000609982 546 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 MIR6738-201ENST00000619620 64 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 U6.115-201ENST00000636045 103 ntBASIC-1.47□□□□□ -2.64
SNCAP37840 MTND5P17-201ENST00000418405 1603 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 RNU6-434P-201ENST00000384376 107 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 MTATP6P18-201ENST00000417994 673 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 AC119618.1-201ENST00000434191 222 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 MTATP6P14-201ENST00000455189 673 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 RNU6-437P-201ENST00000459408 95 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.48□□□□□ -2.65
SNCAP37840 RNA5SP395-201ENST00000516567 118 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 AC069113.1-201ENST00000517763 267 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 MTND1P24-201ENST00000552175 861 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 MIR3179-1-201ENST00000578940 84 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 MIR3179-2-201ENST00000579107 84 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 MIR3179-3-201ENST00000579566 84 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 MIR4423-201ENST00000580922 80 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 TUSC7.1-201ENST00000610969 165 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 MIR3179-4-201ENST00000617599 84 ntBASIC-1.48□□□□□ -2.65
SNCAP37840 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.49□□□□□ -2.65
SNCAP37840 RNY4P3-201ENST00000365254 95 ntBASIC-1.49□□□□□ -2.65
SNCAP37840 RNU6-900P-201ENST00000384498 102 ntBASIC-1.49□□□□□ -2.65
SNCAP37840 SNORD115.1-201ENST00000391109 76 ntBASIC-1.49□□□□□ -2.65
SNCAP37840 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.49□□□□□ -2.65
SNCAP37840 AP003181.2-201ENST00000528941 181 ntBASIC-1.49□□□□□ -2.65
SNCAP37840 AC011458.1-201ENST00000604034 617 ntBASIC-1.49□□□□□ -2.65
SNCAP37840 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.5□□□□□ -2.65
SNCAP37840 RNU6-784P-201ENST00000384330 106 ntBASIC-1.5□□□□□ -2.65
SNCAP37840 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.5□□□□□ -2.65
SNCAP37840 MTATP6P17-201ENST00000431030 672 ntBASIC-1.5□□□□□ -2.65
SNCAP37840 RPL22P17-201ENST00000438729 315 ntBASIC-1.5□□□□□ -2.65
SNCAP37840 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.5□□□□□ -2.65
SNCAP37840 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.5□□□□□ -2.65
SNCAP37840 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.5□□□□□ -2.65
SNCAP37840 AC140658.3-201ENST00000567603 271 ntBASIC-1.5□□□□□ -2.65
SNCAP37840 MIR3941-201ENST00000582572 103 ntBASIC-1.5□□□□□ -2.65
SNCAP37840 AC018462.2-201ENST00000605375 395 ntBASIC-1.5□□□□□ -2.65
SNCAP37840 AC099654.12-201ENST00000639868 649 ntBASIC-1.5□□□□□ -2.65
SNCAP37840 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.51□□□□□ -2.65
SNCAP37840 RNA5SP403-201ENST00000363598 108 ntBASIC-1.51□□□□□ -2.65
SNCAP37840 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.51□□□□□ -2.65
SNCAP37840 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.51□□□□□ -2.65
SNCAP37840 AL590002.1-201ENST00000406554 418 ntBASIC-1.51□□□□□ -2.65
SNCAP37840 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.51□□□□□ -2.65
SNCAP37840 USP9YP12-201ENST00000450481 570 ntBASIC-1.51□□□□□ -2.65
SNCAP37840 UBL5P4-201ENST00000562584 236 ntBASIC-1.51□□□□□ -2.65
SNCAP37840 MIR4306-201ENST00000583390 91 ntBASIC-1.51□□□□□ -2.65
SNCAP37840 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.51□□□□□ -2.65
SNCAP37840 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 MIR539-201ENST00000365690 78 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 RNU6-431P-201ENST00000383874 107 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 MIR181B2-201ENST00000385004 89 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 MIR517B-201ENST00000385102 67 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 RNU6-159P-201ENST00000391080 106 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.52□□□□□ -2.65
SNCAP37840 RNA5SP261-201ENST00000410536 106 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.52□□□□□ -2.65
SNCAP37840 ELOCP4-201ENST00000420090 333 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 USP9YP30-201ENST00000430729 455 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.52□□□□□ -2.65
SNCAP37840 RNU7-104P-201ENST00000459398 79 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 AC008507.2-201ENST00000588402 1176 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 MIR6086-201ENST00000638065 55 ntBASIC-1.52□□□□□ -2.65
SNCAP37840 SNORD114-7-201ENST00000362520 77 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms