Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RNU4-71P-201ENST00000516258 113 ntBASIC1.81□□□□□ -2.12
RFC1P35251 RNU6-295P-201ENST00000516901 104 ntBASIC1.81□□□□□ -2.12
RFC1P35251 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
RFC1P35251 AC024614.2-201ENST00000577584 372 ntBASIC1.81□□□□□ -2.12
RFC1P35251 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
RFC1P35251 AC242852.1-201ENST00000612151 96 ntBASIC1.81□□□□□ -2.12
RFC1P35251 AC141273.2-201ENST00000618989 130 ntBASIC1.81□□□□□ -2.12
RFC1P35251 MIR8054-201ENST00000620877 86 ntBASIC1.81□□□□□ -2.12
RFC1P35251 AL365265.1-201ENST00000621045 234 ntBASIC1.81□□□□□ -2.12
RFC1P35251 AC244015.1-201ENST00000622301 99 ntBASIC1.81□□□□□ -2.12
RFC1P35251 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RFC1P35251 Y_RNA.304-201ENST00000365011 112 ntBASIC1.8□□□□□ -2.12
RFC1P35251 Y_RNA.572-201ENST00000384757 98 ntBASIC1.8□□□□□ -2.12
RFC1P35251 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
RFC1P35251 MIR1289-2-201ENST00000408360 111 ntBASIC1.8□□□□□ -2.12
RFC1P35251 AC069257.2-201ENST00000441819 155 ntBASIC1.8□□□□□ -2.12
RFC1P35251 RPL23AP54-201ENST00000495129 419 ntBASIC1.8□□□□□ -2.12
RFC1P35251 AC100767.1-201ENST00000528178 123 ntBASIC1.8□□□□□ -2.12
RFC1P35251 AC130289.1-201ENST00000577321 73 ntBASIC1.8□□□□□ -2.12
RFC1P35251 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.8□□□□□ -2.12
RFC1P35251 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RFC1P35251 RNU6-1205P-201ENST00000363625 106 ntBASIC1.79□□□□□ -2.12
RFC1P35251 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RFC1P35251 RNU6-440P-201ENST00000390882 105 ntBASIC1.79□□□□□ -2.12
RFC1P35251 MIR1278-201ENST00000408753 81 ntBASIC1.79□□□□□ -2.12
RFC1P35251 RNU6-383P-201ENST00000410864 94 ntBASIC1.79□□□□□ -2.12
RFC1P35251 Y_RNA.626-201ENST00000411288 95 ntBASIC1.79□□□□□ -2.12
RFC1P35251 RNY3P16-201ENST00000516338 101 ntBASIC1.79□□□□□ -2.12
RFC1P35251 AL358944.1-201ENST00000528537 144 ntBASIC1.79□□□□□ -2.12
RFC1P35251 MIR8081-201ENST00000611533 95 ntBASIC1.79□□□□□ -2.12
RFC1P35251 RNU6-661P-201ENST00000362409 107 ntBASIC1.78□□□□□ -2.12
RFC1P35251 RNU6-674P-201ENST00000363831 107 ntBASIC1.78□□□□□ -2.12
RFC1P35251 Y_RNA.257-201ENST00000364596 102 ntBASIC1.78□□□□□ -2.12
RFC1P35251 RNU6-144P-201ENST00000383951 107 ntBASIC1.78□□□□□ -2.12
RFC1P35251 RNU11-5P-201ENST00000391216 129 ntBASIC1.78□□□□□ -2.12
RFC1P35251 SNORA26.9-201ENST00000391322 122 ntBASIC1.78□□□□□ -2.12
RFC1P35251 RNU6-437P-201ENST00000459408 95 ntBASIC1.78□□□□□ -2.12
RFC1P35251 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.78□□□□□ -2.12
RFC1P35251 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.78□□□□□ -2.12
RFC1P35251 RNU6-250P-201ENST00000516958 103 ntBASIC1.78□□□□□ -2.12
RFC1P35251 AP002004.2-201ENST00000531656 154 ntBASIC1.78□□□□□ -2.12
RFC1P35251 CBX3P4-201ENST00000538909 354 ntBASIC1.78□□□□□ -2.12
RFC1P35251 MIR4255-201ENST00000579351 72 ntBASIC1.78□□□□□ -2.12
RFC1P35251 AC090425.1-201ENST00000610007 140 ntBASIC1.78□□□□□ -2.12
RFC1P35251 RNU4-41P-201ENST00000364426 143 ntBASIC1.77□□□□□ -2.13
RFC1P35251 Y_RNA.274-201ENST00000364714 101 ntBASIC1.77□□□□□ -2.13
RFC1P35251 Y_RNA.293-201ENST00000364908 93 ntBASIC1.77□□□□□ -2.13
RFC1P35251 RNU6-1318P-201ENST00000365389 103 ntBASIC1.77□□□□□ -2.13
RFC1P35251 Y_RNA.552-201ENST00000384665 112 ntBASIC1.77□□□□□ -2.13
RFC1P35251 MIR1298-201ENST00000408783 112 ntBASIC1.77□□□□□ -2.13
RFC1P35251 Z98949.2-201ENST00000440996 144 ntBASIC1.77□□□□□ -2.13
RFC1P35251 HMGN2P23-201ENST00000456759 269 ntBASIC1.77□□□□□ -2.13
RFC1P35251 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.77□□□□□ -2.13
RFC1P35251 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RFC1P35251 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RFC1P35251 Y_RNA.200-201ENST00000364018 102 ntBASIC1.76□□□□□ -2.13
RFC1P35251 Y_RNA.203-201ENST00000364106 102 ntBASIC1.76□□□□□ -2.13
RFC1P35251 Y_RNA.796-201ENST00000364268 102 ntBASIC1.76□□□□□ -2.13
RFC1P35251 Y_RNA.253-201ENST00000364562 112 ntBASIC1.76□□□□□ -2.13
RFC1P35251 Y_RNA.799-201ENST00000364992 102 ntBASIC1.76□□□□□ -2.13
RFC1P35251 MIR562-201ENST00000384894 95 ntBASIC1.76□□□□□ -2.13
RFC1P35251 MIR626-201ENST00000385032 94 ntBASIC1.76□□□□□ -2.13
RFC1P35251 RNU2-7P-201ENST00000410794 178 ntBASIC1.76□□□□□ -2.13
RFC1P35251 AL049830.1-201ENST00000468034 425 ntBASIC1.76□□□□□ -2.13
RFC1P35251 COX6CP14-201ENST00000469580 174 ntBASIC1.76□□□□□ -2.13
RFC1P35251 AC099513.1-201ENST00000490423 301 ntBASIC1.76□□□□□ -2.13
RFC1P35251 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.76□□□□□ -2.13
RFC1P35251 MIR4285-201ENST00000581001 85 ntBASIC1.76□□□□□ -2.13
RFC1P35251 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RFC1P35251 snoU2_19.4-201ENST00000364329 80 ntBASIC1.75□□□□□ -2.13
RFC1P35251 RNU6-1031P-201ENST00000384773 107 ntBASIC1.75□□□□□ -2.13
RFC1P35251 MIR526A2-201ENST00000390198 65 ntBASIC1.75□□□□□ -2.13
RFC1P35251 Y_RNA.621-201ENST00000411065 96 ntBASIC1.75□□□□□ -2.13
RFC1P35251 CYCSP49-201ENST00000420810 319 ntBASIC1.75□□□□□ -2.13
RFC1P35251 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.75□□□□□ -2.13
RFC1P35251 OR9P1P-201ENST00000496431 281 ntBASIC1.75□□□□□ -2.13
RFC1P35251 RNU2-56P-201ENST00000516826 190 ntBASIC1.75□□□□□ -2.13
RFC1P35251 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.75□□□□□ -2.13
RFC1P35251 Y_RNA.802-201ENST00000614892 130 ntBASIC1.75□□□□□ -2.13
RFC1P35251 MIR8074-201ENST00000615081 81 ntBASIC1.75□□□□□ -2.13
RFC1P35251 AL591926.4-201ENST00000616895 298 ntBASIC1.75□□□□□ -2.13
RFC1P35251 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RFC1P35251 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RFC1P35251 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
RFC1P35251 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
RFC1P35251 Y_RNA.24-201ENST00000362508 103 ntBASIC1.74□□□□□ -2.13
RFC1P35251 RNU6-1209P-201ENST00000363655 107 ntBASIC1.74□□□□□ -2.13
RFC1P35251 Y_RNA.199-201ENST00000364014 102 ntBASIC1.74□□□□□ -2.13
RFC1P35251 Y_RNA.262-201ENST00000364641 102 ntBASIC1.74□□□□□ -2.13
RFC1P35251 RNU6-969P-201ENST00000383900 105 ntBASIC1.74□□□□□ -2.13
RFC1P35251 RNU6-439P-201ENST00000384188 106 ntBASIC1.74□□□□□ -2.13
RFC1P35251 AL627390.1-201ENST00000396055 340 ntBASIC1.74□□□□□ -2.13
RFC1P35251 STAG3L5P-204ENST00000443759 179 ntBASIC1.74□□□□□ -2.13
RFC1P35251 snoU13.27-201ENST00000459278 104 ntBASIC1.74□□□□□ -2.13
RFC1P35251 RNU6-138P-201ENST00000515952 107 ntBASIC1.74□□□□□ -2.13
RFC1P35251 RNA5SP481-201ENST00000516814 122 ntBASIC1.74□□□□□ -2.13
RFC1P35251 RNU6-794P-201ENST00000517261 64 ntBASIC1.74□□□□□ -2.13
RFC1P35251 MIR4308-201ENST00000580634 81 ntBASIC1.74□□□□□ -2.13
RFC1P35251 AL021707.8-201ENST00000609428 183 ntBASIC1.74□□□□□ -2.13
RFC1P35251 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms