Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.25□□□□□ -1.89
GPC1P35052 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
GPC1P35052 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
GPC1P35052 SNORD115-19-201ENST00000363098 82 ntBASIC3.24□□□□□ -1.89
GPC1P35052 Y_RNA.99-201ENST00000363138 105 ntBASIC3.24□□□□□ -1.89
GPC1P35052 SNORD115-18-201ENST00000363293 82 ntBASIC3.24□□□□□ -1.89
GPC1P35052 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.24□□□□□ -1.89
GPC1P35052 SNORA68.1-201ENST00000364537 132 ntBASIC3.24□□□□□ -1.89
GPC1P35052 SNORD115-17-201ENST00000364612 82 ntBASIC3.24□□□□□ -1.89
GPC1P35052 SNORA5A-201ENST00000384111 134 ntBASIC3.24□□□□□ -1.89
GPC1P35052 RNU6-160P-201ENST00000384591 107 ntBASIC3.24□□□□□ -1.89
GPC1P35052 AC096949.1-201ENST00000412047 152 ntBASIC3.24□□□□□ -1.89
GPC1P35052 MRPL35P3-201ENST00000421557 364 ntBASIC3.24□□□□□ -1.89
GPC1P35052 AL133547.1-201ENST00000448546 220 ntBASIC3.24□□□□□ -1.89
GPC1P35052 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.24□□□□□ -1.89
GPC1P35052 AC018868.1-201ENST00000491307 315 ntBASIC3.24□□□□□ -1.89
GPC1P35052 AC073346.2-201ENST00000624724 2058 ntBASIC3.23□□□□□ -1.89
GPC1P35052 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
GPC1P35052 Y_RNA.244-201ENST00000364484 109 ntBASIC3.23□□□□□ -1.89
GPC1P35052 RNU6-60P-201ENST00000364792 103 ntBASIC3.23□□□□□ -1.89
GPC1P35052 BTF3P4-201ENST00000418852 495 ntBASIC3.23□□□□□ -1.89
GPC1P35052 STAG3L5P-204ENST00000443759 179 ntBASIC3.23□□□□□ -1.89
GPC1P35052 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.23□□□□□ -1.89
GPC1P35052 RNA5SP367-201ENST00000516557 118 ntBASIC3.23□□□□□ -1.89
GPC1P35052 AC090821.2-201ENST00000523552 176 ntBASIC3.23□□□□□ -1.89
GPC1P35052 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.23□□□□□ -1.89
GPC1P35052 AC091304.10-201ENST00000641554 121 ntBASIC3.23□□□□□ -1.89
GPC1P35052 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GPC1P35052 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GPC1P35052 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.22□□□□□ -1.89
GPC1P35052 Y_RNA.190-201ENST00000363964 101 ntBASIC3.22□□□□□ -1.89
GPC1P35052 Y_RNA.221-201ENST00000364248 96 ntBASIC3.22□□□□□ -1.89
GPC1P35052 SNORA73.2-201ENST00000364946 201 ntBASIC3.22□□□□□ -1.89
GPC1P35052 SNORA25B-201ENST00000365507 128 ntBASIC3.22□□□□□ -1.89
GPC1P35052 RNA5SP109-201ENST00000391010 116 ntBASIC3.22□□□□□ -1.89
GPC1P35052 AL451046.2-201ENST00000403074 277 ntBASIC3.22□□□□□ -1.89
GPC1P35052 RNU6-402P-201ENST00000410678 103 ntBASIC3.22□□□□□ -1.89
GPC1P35052 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.22□□□□□ -1.89
GPC1P35052 CYCSP4-201ENST00000429682 331 ntBASIC3.22□□□□□ -1.89
GPC1P35052 RNU7-96P-201ENST00000459535 64 ntBASIC3.22□□□□□ -1.89
GPC1P35052 AC025518.1-201ENST00000479856 347 ntBASIC3.22□□□□□ -1.89
GPC1P35052 AC092185.1-201ENST00000491371 97 ntBASIC3.22□□□□□ -1.89
GPC1P35052 RPL23AP63-201ENST00000498752 471 ntBASIC3.22□□□□□ -1.89
GPC1P35052 RNU6-998P-201ENST00000515894 101 ntBASIC3.22□□□□□ -1.89
GPC1P35052 Y_RNA.659-201ENST00000515994 113 ntBASIC3.22□□□□□ -1.89
GPC1P35052 RNU7-28P-201ENST00000516759 62 ntBASIC3.22□□□□□ -1.89
GPC1P35052 AC009093.8-201ENST00000641769 292 ntBASIC3.22□□□□□ -1.89
GPC1P35052 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
GPC1P35052 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.89
GPC1P35052 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
GPC1P35052 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
GPC1P35052 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GPC1P35052 RNU6-1125P-201ENST00000363601 107 ntBASIC3.21□□□□□ -1.9
GPC1P35052 SNORD45B-201ENST00000364617 72 ntBASIC3.21□□□□□ -1.9
GPC1P35052 Y_RNA.494-201ENST00000384432 111 ntBASIC3.21□□□□□ -1.9
GPC1P35052 MIR218-2-201ENST00000385006 110 ntBASIC3.21□□□□□ -1.9
GPC1P35052 RNA5SP293-201ENST00000410527 113 ntBASIC3.21□□□□□ -1.9
GPC1P35052 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.21□□□□□ -1.9
GPC1P35052 RNU2-11P-201ENST00000459191 187 ntBASIC3.21□□□□□ -1.9
GPC1P35052 RNU7-113P-201ENST00000459273 62 ntBASIC3.21□□□□□ -1.9
GPC1P35052 RNU7-45P-201ENST00000459460 63 ntBASIC3.21□□□□□ -1.9
GPC1P35052 RPS29P12-201ENST00000460178 152 ntBASIC3.21□□□□□ -1.9
GPC1P35052 RPS27P29-201ENST00000463110 252 ntBASIC3.21□□□□□ -1.9
GPC1P35052 SNORA31.4-201ENST00000516049 129 ntBASIC3.21□□□□□ -1.9
GPC1P35052 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.21□□□□□ -1.9
GPC1P35052 AC007536.1-201ENST00000533382 349 ntBASIC3.21□□□□□ -1.9
GPC1P35052 ZNF861P-201ENST00000588126 639 ntBASIC3.21□□□□□ -1.9
GPC1P35052 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.21□□□□□ -1.9
GPC1P35052 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.21□□□□□ -1.9
GPC1P35052 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GPC1P35052 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GPC1P35052 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.21□□□□□ -1.9
GPC1P35052 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
GPC1P35052 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.9
GPC1P35052 Y_RNA.299-201ENST00000364973 94 ntBASIC3.2□□□□□ -1.9
GPC1P35052 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
GPC1P35052 SNORD116-22-201ENST00000384430 92 ntBASIC3.2□□□□□ -1.9
GPC1P35052 MIR200C-201ENST00000384980 68 ntBASIC3.2□□□□□ -1.9
GPC1P35052 RNU6-679P-201ENST00000391003 106 ntBASIC3.2□□□□□ -1.9
GPC1P35052 RNU4-69P-201ENST00000410677 143 ntBASIC3.2□□□□□ -1.9
GPC1P35052 MIR4777-201ENST00000583710 86 ntBASIC3.2□□□□□ -1.9
GPC1P35052 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.2□□□□□ -1.9
GPC1P35052 MIR6075-201ENST00000620782 95 ntBASIC3.2□□□□□ -1.9
GPC1P35052 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.2□□□□□ -1.9
GPC1P35052 AC092881.1-201ENST00000638218 2733 ntBASIC3.2□□□□□ -1.9
GPC1P35052 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
GPC1P35052 Y_RNA.96-201ENST00000363092 109 ntBASIC3.19□□□□□ -1.9
GPC1P35052 Y_RNA.171-201ENST00000363760 102 ntBASIC3.19□□□□□ -1.9
GPC1P35052 RNU6-424P-201ENST00000384367 105 ntBASIC3.19□□□□□ -1.9
GPC1P35052 RNU6-220P-201ENST00000390919 107 ntBASIC3.19□□□□□ -1.9
GPC1P35052 RPS29P4-201ENST00000414733 161 ntBASIC3.19□□□□□ -1.9
GPC1P35052 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
GPC1P35052 POLR2J4-204ENST00000418424 324 ntBASIC3.19□□□□□ -1.9
GPC1P35052 RN7SL504P-201ENST00000494496 287 ntBASIC3.19□□□□□ -1.9
GPC1P35052 RNA5SP395-201ENST00000516567 118 ntBASIC3.19□□□□□ -1.9
GPC1P35052 RNU7-181P-201ENST00000517234 74 ntBASIC3.19□□□□□ -1.9
GPC1P35052 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
GPC1P35052 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GPC1P35052 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GPC1P35052 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms