Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SLC6A4P31645 Y_RNA.580-201ENST00000391004 95 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 SNORA79-201ENST00000408376 140 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 MIR1278-201ENST00000408753 81 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 RNU4-43P-201ENST00000410628 137 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 SUMO1P3-201ENST00000439961 304 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 AL121914.1-201ENST00000450188 156 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 HMGN1P7-201ENST00000491722 313 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 AC107027.2-201ENST00000512197 115 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 RNU6-1291P-201ENST00000516591 104 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 RNU7-28P-201ENST00000516759 62 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 RNU2-56P-201ENST00000516826 190 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 RPL23AP91-201ENST00000569211 455 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 MIR4529-201ENST00000578110 78 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 AC087685.1-201ENST00000587507 141 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 AC078899.2-201ENST00000595282 212 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 AL353997.5-201ENST00000618886 171 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 U1.36-201ENST00000620684 176 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 MTND1P7-201ENST00000632801 297 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SLC6A4P31645 AC005336.3-201ENST00000623833 2679 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 RNU6-1209P-201ENST00000363655 107 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 Y_RNA.796-201ENST00000364268 102 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 Y_RNA.799-201ENST00000364992 102 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 RNU6-746P-201ENST00000384112 109 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 RNU6-950P-201ENST00000384651 107 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 MIR597-201ENST00000384968 97 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 MIR15B-201ENST00000385045 98 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 SNORA48.1-201ENST00000390879 135 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 RNU6-239P-201ENST00000390990 99 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 SEPT7P4-201ENST00000437076 306 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 MTND2P29-201ENST00000438595 412 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 AL049830.1-201ENST00000468034 425 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 RNA5SP82-201ENST00000516707 92 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 MIR3144-201ENST00000579460 79 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 MIR4662B-201ENST00000579498 81 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 uc_338.4-201ENST00000616635 176 ntBASIC2.2□□□□□ -2.06
SLC6A4P31645 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.2□□□□□ -2.06
SLC6A4P31645 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLC6A4P31645 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLC6A4P31645 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SLC6A4P31645 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SLC6A4P31645 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
SLC6A4P31645 AC131280.1-202ENST00000624067 4211 ntBASIC2.19□□□□□ -2.06
SLC6A4P31645 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
SLC6A4P31645 Y_RNA.272-201ENST00000364696 102 ntBASIC2.19□□□□□ -2.06
SLC6A4P31645 MT-TT-201ENST00000387460 66 ntBASIC2.19□□□□□ -2.06
SLC6A4P31645 SNORA48.3-201ENST00000391081 134 ntBASIC2.19□□□□□ -2.06
SLC6A4P31645 Y_RNA.587-201ENST00000391210 103 ntBASIC2.19□□□□□ -2.06
SLC6A4P31645 RNU5E-9P-201ENST00000411164 104 ntBASIC2.19□□□□□ -2.06
SLC6A4P31645 SNORD11-201ENST00000459124 84 ntBASIC2.19□□□□□ -2.06
SLC6A4P31645 RNU7-193P-201ENST00000516723 65 ntBASIC2.19□□□□□ -2.06
SLC6A4P31645 AL160236.1-201ENST00000556317 195 ntBASIC2.19□□□□□ -2.06
SLC6A4P31645 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.19□□□□□ -2.06
SLC6A4P31645 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SLC6A4P31645 RNA5SP99-201ENST00000364020 114 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 Y_RNA.253-201ENST00000364562 112 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 RNY1P5-201ENST00000383890 115 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 RNU6-1080P-201ENST00000383982 107 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 RNA5SP482-201ENST00000391269 118 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 SNORA26-201ENST00000391286 122 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 AC245047.3-201ENST00000429428 127 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.18□□□□□ -2.06
SLC6A4P31645 RNU6-255P-201ENST00000516957 105 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 AC084364.2-201ENST00000546924 395 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 MIR5094-201ENST00000578766 85 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 AC012640.5-201ENST00000623897 319 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 MIR219B-201ENST00000637023 88 ntBASIC2.18□□□□□ -2.06
SLC6A4P31645 SNORA1B-201ENST00000362535 133 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 Y_RNA.337-201ENST00000365312 102 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 RNU6-449P-201ENST00000383914 107 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 RNU6-643P-201ENST00000384018 107 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.17□□□□□ -2.06
SLC6A4P31645 SNORD77.4-201ENST00000516158 81 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 Y_RNA.703-201ENST00000516846 111 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 SNORA31.25-201ENST00000517242 134 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.17□□□□□ -2.06
SLC6A4P31645 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 AL049861.1-201ENST00000603130 150 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 AC022217.4-201ENST00000604389 163 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 SNORA28-201ENST00000606769 126 ntBASIC2.17□□□□□ -2.06
SLC6A4P31645 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SLC6A4P31645 RNU6-1138P-201ENST00000365359 106 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 Y_RNA.432-201ENST00000384087 111 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 SNORD23.1-201ENST00000408212 104 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 SNRPGP10-201ENST00000432323 225 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 AC245047.4-201ENST00000433189 144 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.16□□□□□ -2.06
SLC6A4P31645 AC104435.1-201ENST00000483483 166 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 OR9P1P-201ENST00000496431 281 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 RNU6-1299P-201ENST00000516316 100 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 RNA5SP153-201ENST00000516498 76 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 AC104465.1-201ENST00000611365 139 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 MIR203B-201ENST00000636080 86 ntBASIC2.16□□□□□ -2.06
SLC6A4P31645 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms