Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 SNORD31B-201ENST00000364977 69 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 RNU6-1235P-201ENST00000384559 107 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 MIR504-201ENST00000385065 83 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 AC016717.1-201ENST00000448918 286 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 RNU6-498P-201ENST00000459468 107 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 RPS27P22-201ENST00000478056 241 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 AC011406.1-201ENST00000512440 370 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 RNU6-904P-201ENST00000516206 101 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXA10P31260 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXA10P31260 JPX_2.1-201ENST00000614161 69 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 U6.73-201ENST00000619194 103 ntBASIC3.17□□□□□ -1.9
HOXA10P31260 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXA10P31260 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXA10P31260 MIR302B-201ENST00000362188 73 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 RNU6-1240P-201ENST00000365155 104 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 RNU1-109P-201ENST00000383960 147 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 SNORD61-201ENST00000384252 73 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 AL117342.1-201ENST00000404861 406 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 MIR1294-201ENST00000408503 142 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 AC016909.1-201ENST00000415916 166 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 EIF4EP4-201ENST00000424916 578 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 UBBP3-201ENST00000445497 241 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 AC097462.1-201ENST00000514125 324 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 MIR3117-201ENST00000584034 78 ntBASIC3.16□□□□□ -1.9
HOXA10P31260 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HOXA10P31260 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HOXA10P31260 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
HOXA10P31260 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.15□□□□□ -1.9
HOXA10P31260 Y_RNA.93-201ENST00000363066 109 ntBASIC3.15□□□□□ -1.91
HOXA10P31260 Y_RNA.213-201ENST00000364178 111 ntBASIC3.15□□□□□ -1.91
HOXA10P31260 RNU6-234P-201ENST00000365229 104 ntBASIC3.15□□□□□ -1.91
HOXA10P31260 SNORD77.3-201ENST00000391113 65 ntBASIC3.15□□□□□ -1.91
HOXA10P31260 RPL30P14-201ENST00000482744 348 ntBASIC3.15□□□□□ -1.91
HOXA10P31260 NDUFA4P2-201ENST00000489989 244 ntBASIC3.15□□□□□ -1.91
HOXA10P31260 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.15□□□□□ -1.91
HOXA10P31260 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HOXA10P31260 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXA10P31260 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HOXA10P31260 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXA10P31260 RNU6-198P-201ENST00000384258 104 ntBASIC3.14□□□□□ -1.91
HOXA10P31260 AL359511.1-201ENST00000402970 211 ntBASIC3.14□□□□□ -1.91
HOXA10P31260 RNA5SP425-201ENST00000410336 112 ntBASIC3.14□□□□□ -1.91
HOXA10P31260 SNORA19.1-201ENST00000410656 129 ntBASIC3.14□□□□□ -1.91
HOXA10P31260 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXA10P31260 AC010099.1-201ENST00000455434 375 ntBASIC3.14□□□□□ -1.91
HOXA10P31260 MRPS17P9-201ENST00000511924 393 ntBASIC3.14□□□□□ -1.91
HOXA10P31260 AC026421.1-201ENST00000519101 163 ntBASIC3.14□□□□□ -1.91
HOXA10P31260 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
HOXA10P31260 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HOXA10P31260 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXA10P31260 Y_RNA.342-201ENST00000365352 113 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 MIR759-201ENST00000390224 91 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 FO393413.1-201ENST00000402892 195 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 RN7SKP223-201ENST00000410582 62 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 AC097463.2-201ENST00000421074 142 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 AC107297.1-201ENST00000459991 176 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 RN7SL636P-201ENST00000497504 294 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 MIR449C-201ENST00000516047 92 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 RNU2-34P-201ENST00000516534 121 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 RNU7-172P-201ENST00000517125 64 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 AC084364.2-201ENST00000546924 395 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HOXA10P31260 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HOXA10P31260 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.13□□□□□ -1.91
HOXA10P31260 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXA10P31260 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXA10P31260 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA10P31260 AL161431.1-201ENST00000618966 4205 ntBASIC3.12□□□□□ -1.91
HOXA10P31260 MIR548A2-201ENST00000384956 97 ntBASIC3.12□□□□□ -1.91
HOXA10P31260 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.12□□□□□ -1.91
HOXA10P31260 AL513477.1-202ENST00000417061 214 ntBASIC3.12□□□□□ -1.91
HOXA10P31260 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXA10P31260 RNU6-240P-201ENST00000516098 97 ntBASIC3.12□□□□□ -1.91
HOXA10P31260 RNA5SP395-201ENST00000516567 118 ntBASIC3.12□□□□□ -1.91
HOXA10P31260 RNU6-1270P-201ENST00000517128 108 ntBASIC3.12□□□□□ -1.91
HOXA10P31260 MIR4648-201ENST00000580107 72 ntBASIC3.12□□□□□ -1.91
HOXA10P31260 MIR4438-201ENST00000585271 93 ntBASIC3.12□□□□□ -1.91
HOXA10P31260 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HOXA10P31260 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HOXA10P31260 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA10P31260 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA10P31260 AC093010.3-201ENST00000570269 15214 ntBASIC3.12□□□□□ -1.91
HOXA10P31260 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA10P31260 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA10P31260 MIR494-201ENST00000349529 81 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 RNY1P10-201ENST00000363268 113 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 RNU6-414P-201ENST00000363705 104 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 Y_RNA.242-201ENST00000364473 110 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 RNA5SP38-201ENST00000410750 119 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 AC003685.2-201ENST00000422795 395 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 SEM1P1-201ENST00000506694 209 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 RNU6-830P-201ENST00000516353 107 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 RNY4P20-201ENST00000516678 93 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 MIR5197-201ENST00000583721 112 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.11□□□□□ -1.91
HOXA10P31260 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA10P31260 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms