Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 snoU2-30.1-201ENST00000365012 70 ntBASIC2.33□□□□□ -2.04
SDHAP31040 RNU6-950P-201ENST00000384651 107 ntBASIC2.33□□□□□ -2.04
SDHAP31040 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SDHAP31040 SNORA48.1-201ENST00000390879 135 ntBASIC2.33□□□□□ -2.04
SDHAP31040 RN7SKP200-201ENST00000410564 320 ntBASIC2.33□□□□□ -2.04
SDHAP31040 RNA5SP501-201ENST00000410990 112 ntBASIC2.33□□□□□ -2.04
SDHAP31040 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.33□□□□□ -2.04
SDHAP31040 AC092991.1-201ENST00000477176 376 ntBASIC2.33□□□□□ -2.04
SDHAP31040 AC096725.1-201ENST00000514266 313 ntBASIC2.33□□□□□ -2.04
SDHAP31040 RNA5SP282-201ENST00000516355 108 ntBASIC2.33□□□□□ -2.04
SDHAP31040 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
SDHAP31040 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.33□□□□□ -2.04
SDHAP31040 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.33□□□□□ -2.04
SDHAP31040 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
SDHAP31040 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SDHAP31040 SNORD50B-201ENST00000364995 70 ntBASIC2.32□□□□□ -2.04
SDHAP31040 RNU6-81P-201ENST00000365608 104 ntBASIC2.32□□□□□ -2.04
SDHAP31040 RNU6-442P-201ENST00000383968 104 ntBASIC2.32□□□□□ -2.04
SDHAP31040 MIR520A-201ENST00000384862 85 ntBASIC2.32□□□□□ -2.04
SDHAP31040 Y_RNA.586-201ENST00000391146 98 ntBASIC2.32□□□□□ -2.04
SDHAP31040 RNA5SP181-201ENST00000410246 98 ntBASIC2.32□□□□□ -2.04
SDHAP31040 AC105272.1-201ENST00000438604 198 ntBASIC2.32□□□□□ -2.04
SDHAP31040 SNORA18.4-201ENST00000516440 124 ntBASIC2.32□□□□□ -2.04
SDHAP31040 RNU6-1270P-201ENST00000517128 108 ntBASIC2.32□□□□□ -2.04
SDHAP31040 MIR4529-201ENST00000578110 78 ntBASIC2.32□□□□□ -2.04
SDHAP31040 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SDHAP31040 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SDHAP31040 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
SDHAP31040 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SDHAP31040 U8.5-201ENST00000364528 136 ntBASIC2.31□□□□□ -2.04
SDHAP31040 RNU1-51P-201ENST00000365345 176 ntBASIC2.31□□□□□ -2.04
SDHAP31040 RNU6-163P-201ENST00000384396 106 ntBASIC2.31□□□□□ -2.04
SDHAP31040 RNU6-460P-201ENST00000391158 108 ntBASIC2.31□□□□□ -2.04
SDHAP31040 RPS12P2-201ENST00000439728 269 ntBASIC2.31□□□□□ -2.04
SDHAP31040 Y_RNA.666-201ENST00000516187 112 ntBASIC2.31□□□□□ -2.04
SDHAP31040 SNORD45.4-201ENST00000516629 73 ntBASIC2.31□□□□□ -2.04
SDHAP31040 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
SDHAP31040 MIR4762-201ENST00000585261 75 ntBASIC2.31□□□□□ -2.04
SDHAP31040 AC006023.1-201ENST00000603944 259 ntBASIC2.31□□□□□ -2.04
SDHAP31040 U1.36-201ENST00000620684 176 ntBASIC2.31□□□□□ -2.04
SDHAP31040 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
SDHAP31040 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
SDHAP31040 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.3□□□□□ -2.04
SDHAP31040 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SDHAP31040 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SDHAP31040 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SDHAP31040 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SDHAP31040 Y_RNA.66-201ENST00000362862 102 ntBASIC2.3□□□□□ -2.04
SDHAP31040 SNORA67.1-201ENST00000364749 141 ntBASIC2.3□□□□□ -2.04
SDHAP31040 Y_RNA.584-201ENST00000391090 114 ntBASIC2.3□□□□□ -2.04
SDHAP31040 AL034345.1-201ENST00000407768 123 ntBASIC2.3□□□□□ -2.04
SDHAP31040 AL158823.1-201ENST00000418441 478 ntBASIC2.3□□□□□ -2.04
SDHAP31040 MTND4LP9-201ENST00000427694 174 ntBASIC2.3□□□□□ -2.04
SDHAP31040 RNU7-197P-201ENST00000458836 62 ntBASIC2.3□□□□□ -2.04
SDHAP31040 RNU6-693P-201ENST00000516134 107 ntBASIC2.3□□□□□ -2.04
SDHAP31040 SNORA31.10-201ENST00000516482 106 ntBASIC2.3□□□□□ -2.04
SDHAP31040 RNU1-104P-201ENST00000517280 175 ntBASIC2.3□□□□□ -2.04
SDHAP31040 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SDHAP31040 SNORA63D-201ENST00000364359 132 ntBASIC2.29□□□□□ -2.04
SDHAP31040 RNU6-1117P-201ENST00000384525 104 ntBASIC2.29□□□□□ -2.04
SDHAP31040 SNORA80E-201ENST00000384744 137 ntBASIC2.29□□□□□ -2.04
SDHAP31040 AC007064.1-201ENST00000412238 351 ntBASIC2.29□□□□□ -2.04
SDHAP31040 HSPE1P9-201ENST00000440046 311 ntBASIC2.29□□□□□ -2.04
SDHAP31040 SNRPGP13-201ENST00000442212 177 ntBASIC2.29□□□□□ -2.04
SDHAP31040 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.29□□□□□ -2.04
SDHAP31040 SNORA59A-201ENST00000459326 152 ntBASIC2.29□□□□□ -2.04
SDHAP31040 SNORA31.25-201ENST00000517242 134 ntBASIC2.29□□□□□ -2.04
SDHAP31040 AP001328.1-201ENST00000528550 176 ntBASIC2.29□□□□□ -2.04
SDHAP31040 ELOCP29-201ENST00000588193 334 ntBASIC2.29□□□□□ -2.04
SDHAP31040 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
SDHAP31040 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SDHAP31040 RNU6-859P-201ENST00000362728 107 ntBASIC2.28□□□□□ -2.04
SDHAP31040 SNORA4.2-201ENST00000365313 147 ntBASIC2.28□□□□□ -2.04
SDHAP31040 SNORD113-1-201ENST00000365321 69 ntBASIC2.28□□□□□ -2.04
SDHAP31040 SNORD61-201ENST00000384252 73 ntBASIC2.28□□□□□ -2.04
SDHAP31040 Y_RNA.542-201ENST00000384641 111 ntBASIC2.28□□□□□ -2.04
SDHAP31040 RNU6-959P-201ENST00000384671 107 ntBASIC2.28□□□□□ -2.04
SDHAP31040 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SDHAP31040 RNU6-1211P-201ENST00000459179 105 ntBASIC2.28□□□□□ -2.04
SDHAP31040 RNU7-34P-201ENST00000459394 64 ntBASIC2.28□□□□□ -2.04
SDHAP31040 RPL23AP63-201ENST00000498752 471 ntBASIC2.28□□□□□ -2.04
SDHAP31040 SUB1P4-201ENST00000566062 339 ntBASIC2.28□□□□□ -2.04
SDHAP31040 MIR3129-201ENST00000581095 76 ntBASIC2.28□□□□□ -2.04
SDHAP31040 AC011603.4-201ENST00000611325 277 ntBASIC2.28□□□□□ -2.04
SDHAP31040 TUG1_4.1-201ENST00000619464 181 ntBASIC2.28□□□□□ -2.04
SDHAP31040 AC006386.2-201ENST00000624491 75 ntBASIC2.28□□□□□ -2.04
SDHAP31040 AC012005.1-201ENST00000624575 75 ntBASIC2.28□□□□□ -2.04
SDHAP31040 RNY1P11-201ENST00000363759 113 ntBASIC2.27□□□□□ -2.05
SDHAP31040 RNU6-915P-201ENST00000364943 103 ntBASIC2.27□□□□□ -2.05
SDHAP31040 SNORD24-201ENST00000383884 75 ntBASIC2.27□□□□□ -2.05
SDHAP31040 MIR144-201ENST00000384886 86 ntBASIC2.27□□□□□ -2.05
SDHAP31040 MIR524-201ENST00000385242 87 ntBASIC2.27□□□□□ -2.05
SDHAP31040 RNA5SP127-201ENST00000411051 133 ntBASIC2.27□□□□□ -2.05
SDHAP31040 RNA5SP450-201ENST00000411206 102 ntBASIC2.27□□□□□ -2.05
SDHAP31040 COTL1P1-201ENST00000422309 375 ntBASIC2.27□□□□□ -2.05
SDHAP31040 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.27□□□□□ -2.05
SDHAP31040 HMGN2P32-201ENST00000444648 269 ntBASIC2.27□□□□□ -2.05
SDHAP31040 RNU6-971P-201ENST00000516920 106 ntBASIC2.27□□□□□ -2.05
SDHAP31040 AC007751.1-201ENST00000529260 376 ntBASIC2.27□□□□□ -2.05
SDHAP31040 MIR548AI-201ENST00000579940 88 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms