Protein–RNA interactions for Protein: P30084

ECHS1, Enoyl-CoA hydratase, mitochondrial, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1P30084 RNU7-200P-201ENST00000516105 62 ntBASIC2.22□□□□□ -2.05
ECHS1P30084 SUB1P4-201ENST00000566062 339 ntBASIC2.22□□□□□ -2.05
ECHS1P30084 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
ECHS1P30084 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
ECHS1P30084 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
ECHS1P30084 SNORD68-201ENST00000363214 84 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 RNU6-746P-201ENST00000384112 109 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 RNU6-440P-201ENST00000390882 105 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 Y_RNA.580-201ENST00000391004 95 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 STAG3L5P-204ENST00000443759 179 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 SNORA31.10-201ENST00000516482 106 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 RNU7-149P-201ENST00000516739 59 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 Y_RNA.703-201ENST00000516846 111 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 RNA5SP437-201ENST00000517249 129 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 MIR5694-201ENST00000581190 76 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 MIR203B-201ENST00000636080 86 ntBASIC2.21□□□□□ -2.06
ECHS1P30084 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ECHS1P30084 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
ECHS1P30084 Y_RNA.265-201ENST00000364677 108 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 SNORA4.2-201ENST00000365313 147 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 RNU6-449P-201ENST00000383914 107 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 Y_RNA.432-201ENST00000384087 111 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 SNORA67.4-201ENST00000384688 142 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 MIR522-201ENST00000385071 87 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 MIR634-201ENST00000385208 97 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ECHS1P30084 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 RNU2-55P-201ENST00000411146 174 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 OR9P1P-201ENST00000496431 281 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 RNU2-19P-201ENST00000517288 84 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHS1P30084 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
ECHS1P30084 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.2□□□□□ -2.06
ECHS1P30084 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ECHS1P30084 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
ECHS1P30084 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ECHS1P30084 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ECHS1P30084 RNU6-112P-201ENST00000363599 104 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 RNU6-187P-201ENST00000384139 106 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 MIR520A-201ENST00000384862 85 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 RNU6-131P-201ENST00000391144 107 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 SNORD23.1-201ENST00000408212 104 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.19□□□□□ -2.06
ECHS1P30084 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 MRPS17P9-201ENST00000511924 393 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 RNU6-346P-201ENST00000516288 111 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 RNU6-1299P-201ENST00000516316 100 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 RNU7-121P-201ENST00000516604 62 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 RNU6-197P-201ENST00000516680 100 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.19□□□□□ -2.06
ECHS1P30084 Pinc.1-201ENST00000616452 154 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 MTND1P7-201ENST00000632801 297 ntBASIC2.19□□□□□ -2.06
ECHS1P30084 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.19□□□□□ -2.06
ECHS1P30084 Y_RNA.91-201ENST00000363042 107 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 RNU6-1138P-201ENST00000365359 106 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 RNU6-296P-201ENST00000384608 107 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 SNORD72-201ENST00000390994 80 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 RNA5SP482-201ENST00000391269 118 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 SNORA79-201ENST00000408376 140 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 RNU2-7P-201ENST00000410794 178 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 AL158823.1-201ENST00000418441 478 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.18□□□□□ -2.06
ECHS1P30084 AC055731.1-201ENST00000474387 401 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.18□□□□□ -2.06
ECHS1P30084 RPL23AP63-201ENST00000498752 471 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 AC008507.4-201ENST00000585464 127 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 U1.36-201ENST00000620684 176 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 SCARNA15.3-201ENST00000626315 122 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 SCARNA4.1-201ENST00000628597 123 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 MIR3658-201ENST00000636291 56 ntBASIC2.18□□□□□ -2.06
ECHS1P30084 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
ECHS1P30084 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
ECHS1P30084 U8.5-201ENST00000364528 136 ntBASIC2.17□□□□□ -2.06
ECHS1P30084 RNU6-818P-201ENST00000364837 108 ntBASIC2.17□□□□□ -2.06
ECHS1P30084 RNY1P5-201ENST00000383890 115 ntBASIC2.17□□□□□ -2.06
ECHS1P30084 RNU2-70P-201ENST00000410718 179 ntBASIC2.17□□□□□ -2.06
ECHS1P30084 FTH1P12-201ENST00000432137 551 ntBASIC2.17□□□□□ -2.06
ECHS1P30084 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.17□□□□□ -2.06
ECHS1P30084 SCARNA16.3-201ENST00000516595 184 ntBASIC2.17□□□□□ -2.06
ECHS1P30084 RNU7-28P-201ENST00000516759 62 ntBASIC2.17□□□□□ -2.06
ECHS1P30084 AC091544.4-201ENST00000555268 342 ntBASIC2.17□□□□□ -2.06
ECHS1P30084 MIR4762-201ENST00000585261 75 ntBASIC2.17□□□□□ -2.06
ECHS1P30084 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.17□□□□□ -2.06
ECHS1P30084 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.17□□□□□ -2.06
ECHS1P30084 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
ECHS1P30084 ZNF702P-202ENST00000434269 1966 ntBASIC2.16□□□□□ -2.06
ECHS1P30084 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
ECHS1P30084 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.16□□□□□ -2.06
ECHS1P30084 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ECHS1P30084 RNU6-151P-201ENST00000364158 107 ntBASIC2.16□□□□□ -2.06
ECHS1P30084 Y_RNA.337-201ENST00000365312 102 ntBASIC2.16□□□□□ -2.06
ECHS1P30084 RNA5SP100-201ENST00000410903 110 ntBASIC2.16□□□□□ -2.06
ECHS1P30084 RNA5SP59-201ENST00000410922 110 ntBASIC2.16□□□□□ -2.06
ECHS1P30084 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.16□□□□□ -2.06
ECHS1P30084 RNA5SP24-201ENST00000516478 95 ntBASIC2.16□□□□□ -2.06
ECHS1P30084 SNORD116-25-201ENST00000516517 92 ntBASIC2.16□□□□□ -2.06
ECHS1P30084 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 237.2 ms