Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 Y_RNA.489-201ENST00000384410 101 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 RNA5SP482-201ENST00000391269 118 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 AL034345.1-201ENST00000407768 123 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.3□□□□□ -2.04
CNGA1P29973 FTH1P12-201ENST00000432137 551 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 RNU7-34P-201ENST00000459394 64 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 AC099513.1-201ENST00000490423 301 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 OR9P1P-201ENST00000496431 281 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 MRPS17P9-201ENST00000511924 393 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 Y_RNA.679-201ENST00000516416 91 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 MIR4498-201ENST00000577599 66 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 MIR4448-201ENST00000584360 86 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 AC006006.1-201ENST00000603082 144 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 AL096840.1-201ENST00000603287 93 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 AC103810.8-201ENST00000607347 118 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 AL442067.1-201ENST00000613261 223 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CNGA1P29973 RNU4-41P-201ENST00000364426 143 ntBASIC2.29□□□□□ -2.04
CNGA1P29973 Y_RNA.253-201ENST00000364562 112 ntBASIC2.29□□□□□ -2.04
CNGA1P29973 Y_RNA.265-201ENST00000364677 108 ntBASIC2.29□□□□□ -2.04
CNGA1P29973 RNU6-439P-201ENST00000384188 106 ntBASIC2.29□□□□□ -2.04
CNGA1P29973 AL139156.1-201ENST00000412785 841 ntBASIC2.29□□□□□ -2.04
CNGA1P29973 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.29□□□□□ -2.04
CNGA1P29973 AC011921.3-201ENST00000605540 361 ntBASIC2.29□□□□□ -2.04
CNGA1P29973 AC021506.2-201ENST00000612354 169 ntBASIC2.29□□□□□ -2.04
CNGA1P29973 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CNGA1P29973 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.28□□□□□ -2.04
CNGA1P29973 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.28□□□□□ -2.04
CNGA1P29973 RNA5SP182-201ENST00000516064 82 ntBASIC2.28□□□□□ -2.04
CNGA1P29973 SNORD116-28-201ENST00000516123 91 ntBASIC2.28□□□□□ -2.04
CNGA1P29973 RNU6-111P-201ENST00000517179 105 ntBASIC2.28□□□□□ -2.04
CNGA1P29973 MIR4781-201ENST00000585250 76 ntBASIC2.28□□□□□ -2.04
CNGA1P29973 AL591926.4-201ENST00000616895 298 ntBASIC2.28□□□□□ -2.04
CNGA1P29973 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.27□□□□□ -2.05
CNGA1P29973 Y_RNA.226-201ENST00000364337 114 ntBASIC2.27□□□□□ -2.05
CNGA1P29973 Y_RNA.269-201ENST00000364685 89 ntBASIC2.27□□□□□ -2.05
CNGA1P29973 Y_RNA.304-201ENST00000365011 112 ntBASIC2.27□□□□□ -2.05
CNGA1P29973 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.27□□□□□ -2.05
CNGA1P29973 Z98949.2-201ENST00000440996 144 ntBASIC2.27□□□□□ -2.05
CNGA1P29973 HMGN1P7-201ENST00000491722 313 ntBASIC2.27□□□□□ -2.05
CNGA1P29973 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.27□□□□□ -2.05
CNGA1P29973 RNU4-71P-201ENST00000516258 113 ntBASIC2.27□□□□□ -2.05
CNGA1P29973 AC100767.1-201ENST00000528178 123 ntBASIC2.27□□□□□ -2.05
CNGA1P29973 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CNGA1P29973 Y_RNA.65-201ENST00000362846 100 ntBASIC2.26□□□□□ -2.05
CNGA1P29973 RNU6-414P-201ENST00000363705 104 ntBASIC2.26□□□□□ -2.05
CNGA1P29973 RNY1-201ENST00000364228 113 ntBASIC2.26□□□□□ -2.05
CNGA1P29973 Y_RNA.292-201ENST00000364904 97 ntBASIC2.26□□□□□ -2.05
CNGA1P29973 Y_RNA.293-201ENST00000364908 93 ntBASIC2.26□□□□□ -2.05
CNGA1P29973 RNU6-338P-201ENST00000383888 105 ntBASIC2.26□□□□□ -2.05
CNGA1P29973 RNU6-969P-201ENST00000383900 105 ntBASIC2.26□□□□□ -2.05
CNGA1P29973 MIR526A2-201ENST00000390198 65 ntBASIC2.26□□□□□ -2.05
CNGA1P29973 RNU2-40P-201ENST00000410833 196 ntBASIC2.26□□□□□ -2.05
CNGA1P29973 MIR4762-201ENST00000585261 75 ntBASIC2.26□□□□□ -2.05
CNGA1P29973 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.26□□□□□ -2.05
CNGA1P29973 RNU6-379P-201ENST00000363813 104 ntBASIC2.25□□□□□ -2.05
CNGA1P29973 U8.5-201ENST00000364528 136 ntBASIC2.25□□□□□ -2.05
CNGA1P29973 RNA5SP138-201ENST00000365098 114 ntBASIC2.25□□□□□ -2.05
CNGA1P29973 MIR194-1-201ENST00000384892 85 ntBASIC2.25□□□□□ -2.05
CNGA1P29973 AL161935.2-201ENST00000414627 60 ntBASIC2.25□□□□□ -2.05
CNGA1P29973 JTBP1-201ENST00000441314 247 ntBASIC2.25□□□□□ -2.05
CNGA1P29973 MIR5688-201ENST00000580619 83 ntBASIC2.25□□□□□ -2.05
CNGA1P29973 MIR2681-201ENST00000581814 105 ntBASIC2.25□□□□□ -2.05
CNGA1P29973 Y_RNA.802-201ENST00000614892 130 ntBASIC2.25□□□□□ -2.05
CNGA1P29973 Y_RNA.796-201ENST00000364268 102 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 Y_RNA.799-201ENST00000364992 102 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 RNY4P28-201ENST00000365281 93 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 RNU6-203P-201ENST00000384038 104 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 Y_RNA.476-201ENST00000384347 108 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 RNU6-424P-201ENST00000384367 105 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CNGA1P29973 SNORA17.3-201ENST00000391159 129 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 HMGN2P19-201ENST00000425149 265 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 MIR4724-201ENST00000579485 89 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 SNRPGP19-201ENST00000603826 189 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 AL365265.1-201ENST00000621045 234 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 uc_338.20-201ENST00000621563 178 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 AL513423.1-201ENST00000621695 132 ntBASIC2.24□□□□□ -2.05
CNGA1P29973 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CNGA1P29973 MIRLET7C-201ENST00000362160 84 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 MIR126-201ENST00000362291 85 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 MIR367-201ENST00000362299 68 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 RNU6-1209P-201ENST00000363655 107 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 MIR522-201ENST00000385071 87 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CNGA1P29973 MIR1287-201ENST00000408492 90 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 RNU6-383P-201ENST00000410864 94 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 SNRPGP10-201ENST00000432323 225 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 RNU6-717P-201ENST00000459076 104 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 COX6CP14-201ENST00000469580 174 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 MIR8074-201ENST00000615081 81 ntBASIC2.23□□□□□ -2.05
CNGA1P29973 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CNGA1P29973 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 MIR378A-201ENST00000362177 66 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 RNU6-653P-201ENST00000363074 106 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 SNORD68-201ENST00000363214 84 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 RNU4-10P-201ENST00000364383 140 ntBASIC2.22□□□□□ -2.05
CNGA1P29973 SNORA8.3-201ENST00000384679 139 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 309.7 ms