Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC124312.5-201ENST00000604451 268 ntBASIC0.74□□□□□ -2.29
COL8A2P25067 AC004832.4-201ENST00000608952 331 ntBASIC0.74□□□□□ -2.29
COL8A2P25067 7SK.8-201ENST00000612110 250 ntBASIC0.74□□□□□ -2.29
COL8A2P25067 7SK.11-201ENST00000615477 250 ntBASIC0.74□□□□□ -2.29
COL8A2P25067 MIR7111-201ENST00000619751 72 ntBASIC0.74□□□□□ -2.29
COL8A2P25067 7SK.13-201ENST00000622040 250 ntBASIC0.74□□□□□ -2.29
COL8A2P25067 AC134503.1-201ENST00000633048 54 ntBASIC0.74□□□□□ -2.29
COL8A2P25067 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
COL8A2P25067 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.74□□□□□ -2.29
COL8A2P25067 Y_RNA.394-201ENST00000383942 103 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 RNU6-424P-201ENST00000384367 105 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 MIR548P-201ENST00000408336 84 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 RNU6-101P-201ENST00000410323 104 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 RNU6-855P-201ENST00000410395 104 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 CALM2P4-201ENST00000430810 426 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 DYNLT3P2-201ENST00000442517 295 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 RPS4XP11-201ENST00000446897 772 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 RNA5SP168-201ENST00000516642 112 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 AC022616.4-201ENST00000522985 181 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 PART1_1.1-201ENST00000611761 217 ntBASIC0.73□□□□□ -2.29
COL8A2P25067 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.73□□□□□ -2.29
COL8A2P25067 RNU6-199P-201ENST00000362954 107 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 Y_RNA.138-201ENST00000363462 102 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 RNU4-76P-201ENST00000364509 141 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 AC117470.1-201ENST00000381974 330 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 Y_RNA.389-201ENST00000383924 113 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
COL8A2P25067 Y_RNA.645-201ENST00000391229 102 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 U8.16-201ENST00000391279 133 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 RNU4-30P-201ENST00000410245 143 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 RNU6-130P-201ENST00000411112 103 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 RPS20P10-201ENST00000451209 253 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 Y_RNA.711-201ENST00000516993 102 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 Y_RNA.715-201ENST00000517082 110 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.72□□□□□ -2.29
COL8A2P25067 MIR4778-201ENST00000577635 80 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 DEFB117-201ENST00000602356 141 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 AC005972.2-201ENST00000604690 348 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 SNORD113-5-201ENST00000607261 78 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.72□□□□□ -2.29
COL8A2P25067 AC068647.2-201ENST00000637380 353 ntBASIC0.72□□□□□ -2.29
COL8A2P25067 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.72□□□□□ -2.29
COL8A2P25067 SNORD81.1-201ENST00000363064 77 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 Y_RNA.172-201ENST00000363765 102 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 RNU4-41P-201ENST00000364426 143 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 RNU6-450P-201ENST00000364654 107 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 Y_RNA.341-201ENST00000365341 102 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 SNORA22B-201ENST00000383876 138 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 SNORA72-201ENST00000384339 132 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 RNU6-1105P-201ENST00000384774 107 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 MIR489-201ENST00000384923 84 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 RNU6-823P-201ENST00000391042 103 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 MIR1252-201ENST00000408861 65 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 POLR2KP2-201ENST00000438155 177 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 U8.19-201ENST00000459095 133 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 RPL39P38-201ENST00000467018 153 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 AC092991.1-201ENST00000477176 376 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 SEPT14P8-201ENST00000508026 178 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 RNU7-12P-201ENST00000516030 62 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 RNU6-397P-201ENST00000516226 104 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 RNU6-1046P-201ENST00000516538 107 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 RNA5SP404-201ENST00000517118 132 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 RNU6-1223P-201ENST00000517124 104 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 MIR151B-201ENST00000584249 96 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 AC104695.3-201ENST00000604052 296 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 MIR376A1-201ENST00000616574 68 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 AC106754.2-201ENST00000623006 233 ntBASIC0.71□□□□□ -2.3
COL8A2P25067 AC068700.1-201ENST00000565862 3754 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 SNORD68-201ENST00000363214 84 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 Y_RNA.158-201ENST00000363651 101 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 Y_RNA.183-201ENST00000363882 113 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 Y_RNA.310-201ENST00000365063 113 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 Y_RNA.368-201ENST00000365547 113 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 Y_RNA.380-201ENST00000365663 111 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 Y_RNA.383-201ENST00000383855 97 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 Y_RNA.456-201ENST00000384232 111 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 Z98949.2-201ENST00000440996 144 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.7□□□□□ -2.3
COL8A2P25067 CYCTP-201ENST00000504253 315 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 RNU6-322P-201ENST00000516010 103 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 SNORA40.15-201ENST00000516884 107 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 RNU7-116P-201ENST00000516940 62 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 DEFB108E-201ENST00000524692 240 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 AC136932.1-201ENST00000574771 208 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 MIR3664-201ENST00000579074 99 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 MIR3145-201ENST00000580727 82 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 MIR4300-201ENST00000581016 96 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 MIR3171-201ENST00000584270 74 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 RAC1P9-201ENST00000604990 392 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 BX284668.6-201ENST00000606899 438 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 AC022709.1-201ENST00000615967 87 ntBASIC0.7□□□□□ -2.3
COL8A2P25067 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.7□□□□□ -2.3
COL8A2P25067 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL8A2P25067 MIRLET7C-201ENST00000362160 84 ntBASIC0.69□□□□□ -2.3
COL8A2P25067 Y_RNA.11-201ENST00000362375 109 ntBASIC0.69□□□□□ -2.3
COL8A2P25067 SNORD113-8-201ENST00000363497 74 ntBASIC0.69□□□□□ -2.3
COL8A2P25067 Y_RNA.202-201ENST00000364083 110 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms