Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
XPAP23025 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
XPAP23025 RNY1P5-201ENST00000383890 115 ntBASIC2.33□□□□□ -2.04
XPAP23025 RNU6-484P-201ENST00000384016 107 ntBASIC2.33□□□□□ -2.04
XPAP23025 RNU6-643P-201ENST00000384018 107 ntBASIC2.33□□□□□ -2.04
XPAP23025 MIR562-201ENST00000384894 95 ntBASIC2.33□□□□□ -2.04
XPAP23025 SNORA11.4-201ENST00000408823 129 ntBASIC2.33□□□□□ -2.04
XPAP23025 SNRPGP10-201ENST00000432323 225 ntBASIC2.33□□□□□ -2.04
XPAP23025 AC069114.2-201ENST00000604699 304 ntBASIC2.33□□□□□ -2.04
XPAP23025 JPX_2.1-201ENST00000614161 69 ntBASIC2.33□□□□□ -2.04
XPAP23025 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
XPAP23025 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
XPAP23025 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
XPAP23025 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
XPAP23025 RNU6-449P-201ENST00000383914 107 ntBASIC2.32□□□□□ -2.04
XPAP23025 RNA5SP181-201ENST00000410246 98 ntBASIC2.32□□□□□ -2.04
XPAP23025 RNA5SP501-201ENST00000410990 112 ntBASIC2.32□□□□□ -2.04
XPAP23025 MLLT10P1-201ENST00000418346 262 ntBASIC2.32□□□□□ -2.04
XPAP23025 AC245047.3-201ENST00000429428 127 ntBASIC2.32□□□□□ -2.04
XPAP23025 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.32□□□□□ -2.04
XPAP23025 RNA5SP233-201ENST00000459153 113 ntBASIC2.32□□□□□ -2.04
XPAP23025 RNU7-94P-201ENST00000459576 63 ntBASIC2.32□□□□□ -2.04
XPAP23025 AL049830.1-201ENST00000468034 425 ntBASIC2.32□□□□□ -2.04
XPAP23025 AC107027.2-201ENST00000512197 115 ntBASIC2.32□□□□□ -2.04
XPAP23025 SNORD77.4-201ENST00000516158 81 ntBASIC2.32□□□□□ -2.04
XPAP23025 RNU7-149P-201ENST00000516739 59 ntBASIC2.32□□□□□ -2.04
XPAP23025 RNA5SP402-201ENST00000517148 110 ntBASIC2.32□□□□□ -2.04
XPAP23025 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
XPAP23025 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
XPAP23025 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
XPAP23025 MIR126-201ENST00000362291 85 ntBASIC2.31□□□□□ -2.04
XPAP23025 U8.2-201ENST00000363156 134 ntBASIC2.31□□□□□ -2.04
XPAP23025 RNU6-151P-201ENST00000364158 107 ntBASIC2.31□□□□□ -2.04
XPAP23025 RNU6-1019P-201ENST00000364424 107 ntBASIC2.31□□□□□ -2.04
XPAP23025 RNA5SP425-201ENST00000410336 112 ntBASIC2.31□□□□□ -2.04
XPAP23025 RNU4-43P-201ENST00000410628 137 ntBASIC2.31□□□□□ -2.04
XPAP23025 RNA5SP450-201ENST00000411206 102 ntBASIC2.31□□□□□ -2.04
XPAP23025 CYCSP49-201ENST00000420810 319 ntBASIC2.31□□□□□ -2.04
XPAP23025 RPS27P21-201ENST00000486977 252 ntBASIC2.31□□□□□ -2.04
XPAP23025 SNORD116-25-201ENST00000516517 92 ntBASIC2.31□□□□□ -2.04
XPAP23025 AL358944.1-201ENST00000528537 144 ntBASIC2.31□□□□□ -2.04
XPAP23025 AP002004.2-201ENST00000531656 154 ntBASIC2.31□□□□□ -2.04
XPAP23025 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
XPAP23025 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
XPAP23025 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
XPAP23025 Y_RNA.91-201ENST00000363042 107 ntBASIC2.3□□□□□ -2.04
XPAP23025 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
XPAP23025 RNU11-5P-201ENST00000391216 129 ntBASIC2.3□□□□□ -2.04
XPAP23025 Z98742.3-201ENST00000418637 326 ntBASIC2.3□□□□□ -2.04
XPAP23025 AL356320.1-201ENST00000429616 163 ntBASIC2.3□□□□□ -2.04
XPAP23025 SNORA31.10-201ENST00000516482 106 ntBASIC2.3□□□□□ -2.04
XPAP23025 RNU2-56P-201ENST00000516826 190 ntBASIC2.3□□□□□ -2.04
XPAP23025 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
XPAP23025 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
XPAP23025 SNORA4.2-201ENST00000365313 147 ntBASIC2.29□□□□□ -2.04
XPAP23025 Y_RNA.432-201ENST00000384087 111 ntBASIC2.29□□□□□ -2.04
XPAP23025 RNU6-768P-201ENST00000384683 107 ntBASIC2.29□□□□□ -2.04
XPAP23025 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
XPAP23025 SNORA48.1-201ENST00000390879 135 ntBASIC2.29□□□□□ -2.04
XPAP23025 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.29□□□□□ -2.04
XPAP23025 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.29□□□□□ -2.04
XPAP23025 HSPE1P9-201ENST00000440046 311 ntBASIC2.29□□□□□ -2.04
XPAP23025 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
XPAP23025 Pinc.1-201ENST00000616452 154 ntBASIC2.29□□□□□ -2.04
XPAP23025 Y_RNA.778-201ENST00000620203 90 ntBASIC2.29□□□□□ -2.04
XPAP23025 MIR8054-201ENST00000620877 86 ntBASIC2.29□□□□□ -2.04
XPAP23025 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
XPAP23025 ZNF658B-202ENST00000615961 3375 ntBASIC2.29□□□□□ -2.04
XPAP23025 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.28□□□□□ -2.04
XPAP23025 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
XPAP23025 SNORD68-201ENST00000363214 84 ntBASIC2.28□□□□□ -2.04
XPAP23025 Y_RNA.400-201ENST00000383963 111 ntBASIC2.28□□□□□ -2.04
XPAP23025 SNORA70B-201ENST00000384210 135 ntBASIC2.28□□□□□ -2.04
XPAP23025 MIR522-201ENST00000385071 87 ntBASIC2.28□□□□□ -2.04
XPAP23025 RNU6-440P-201ENST00000390882 105 ntBASIC2.28□□□□□ -2.04
XPAP23025 SNORD72-201ENST00000390994 80 ntBASIC2.28□□□□□ -2.04
XPAP23025 AL356379.1-201ENST00000414105 126 ntBASIC2.28□□□□□ -2.04
XPAP23025 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.28□□□□□ -2.04
XPAP23025 MRPS17P9-201ENST00000511924 393 ntBASIC2.28□□□□□ -2.04
XPAP23025 RNA5SP272-201ENST00000516095 111 ntBASIC2.28□□□□□ -2.04
XPAP23025 RNU6-1299P-201ENST00000516316 100 ntBASIC2.28□□□□□ -2.04
XPAP23025 RNU6-197P-201ENST00000516680 100 ntBASIC2.28□□□□□ -2.04
XPAP23025 SUB1P4-201ENST00000566062 339 ntBASIC2.28□□□□□ -2.04
XPAP23025 MIR6766-201ENST00000622641 72 ntBASIC2.28□□□□□ -2.04
XPAP23025 MTND1P7-201ENST00000632801 297 ntBASIC2.28□□□□□ -2.04
XPAP23025 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.04
XPAP23025 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
XPAP23025 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
XPAP23025 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
XPAP23025 SNORA63D-201ENST00000364359 132 ntBASIC2.27□□□□□ -2.05
XPAP23025 RNU4-11P-201ENST00000365287 132 ntBASIC2.27□□□□□ -2.05
XPAP23025 Y_RNA.337-201ENST00000365312 102 ntBASIC2.27□□□□□ -2.05
XPAP23025 RNU6-1336P-201ENST00000383886 109 ntBASIC2.27□□□□□ -2.05
XPAP23025 Y_RNA.486-201ENST00000384398 107 ntBASIC2.27□□□□□ -2.05
XPAP23025 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
XPAP23025 SNORA3.2-201ENST00000408221 125 ntBASIC2.27□□□□□ -2.05
XPAP23025 RNU2-55P-201ENST00000411146 174 ntBASIC2.27□□□□□ -2.05
XPAP23025 AL158823.1-201ENST00000418441 478 ntBASIC2.27□□□□□ -2.05
XPAP23025 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
XPAP23025 AL392103.1-201ENST00000447000 198 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms