Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 Y_RNA.52-201ENST00000362760 96 ntBASIC3.25□□□□□ -1.89
RFX1P22670 SNORA63D-201ENST00000364359 132 ntBASIC3.25□□□□□ -1.89
RFX1P22670 Y_RNA.265-201ENST00000364677 108 ntBASIC3.25□□□□□ -1.89
RFX1P22670 snoU2-30.1-201ENST00000365012 70 ntBASIC3.25□□□□□ -1.89
RFX1P22670 Y_RNA.336-201ENST00000365307 109 ntBASIC3.25□□□□□ -1.89
RFX1P22670 RNU6-950P-201ENST00000384651 107 ntBASIC3.25□□□□□ -1.89
RFX1P22670 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX1P22670 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX1P22670 Y_RNA.690-201ENST00000516603 95 ntBASIC3.25□□□□□ -1.89
RFX1P22670 ELOCP29-201ENST00000588193 334 ntBASIC3.25□□□□□ -1.89
RFX1P22670 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.24□□□□□ -1.89
RFX1P22670 AC008264.2-201ENST00000610193 3731 ntBASIC3.24□□□□□ -1.89
RFX1P22670 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RFX1P22670 MIR22-201ENST00000362190 85 ntBASIC3.24□□□□□ -1.89
RFX1P22670 RNU6-1084P-201ENST00000362498 107 ntBASIC3.24□□□□□ -1.89
RFX1P22670 Y_RNA.280-201ENST00000364765 112 ntBASIC3.24□□□□□ -1.89
RFX1P22670 RNU6-442P-201ENST00000383968 104 ntBASIC3.24□□□□□ -1.89
RFX1P22670 MIR548A2-201ENST00000384956 97 ntBASIC3.24□□□□□ -1.89
RFX1P22670 MIR802-201ENST00000390235 94 ntBASIC3.24□□□□□ -1.89
RFX1P22670 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RFX1P22670 SNORA48.1-201ENST00000390879 135 ntBASIC3.24□□□□□ -1.89
RFX1P22670 HMGN2P3-201ENST00000433603 273 ntBASIC3.24□□□□□ -1.89
RFX1P22670 HMGN2P5-201ENST00000436882 273 ntBASIC3.24□□□□□ -1.89
RFX1P22670 AL158147.1-201ENST00000443970 75 ntBASIC3.24□□□□□ -1.89
RFX1P22670 AC107016.2-201ENST00000547968 190 ntBASIC3.24□□□□□ -1.89
RFX1P22670 MIR5094-201ENST00000578766 85 ntBASIC3.24□□□□□ -1.89
RFX1P22670 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.23□□□□□ -1.89
RFX1P22670 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.23□□□□□ -1.89
RFX1P22670 Y_RNA.114-201ENST00000363265 113 ntBASIC3.23□□□□□ -1.89
RFX1P22670 SNORD14E-201ENST00000364009 85 ntBASIC3.23□□□□□ -1.89
RFX1P22670 RNU6-309P-201ENST00000364573 106 ntBASIC3.23□□□□□ -1.89
RFX1P22670 SNORD20-201ENST00000384550 80 ntBASIC3.23□□□□□ -1.89
RFX1P22670 MIR597-201ENST00000384968 97 ntBASIC3.23□□□□□ -1.89
RFX1P22670 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.23□□□□□ -1.89
RFX1P22670 RNA5SP367-201ENST00000516557 118 ntBASIC3.23□□□□□ -1.89
RFX1P22670 Y_RNA.712-201ENST00000517011 92 ntBASIC3.23□□□□□ -1.89
RFX1P22670 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.23□□□□□ -1.89
RFX1P22670 MIR3162-201ENST00000581818 82 ntBASIC3.23□□□□□ -1.89
RFX1P22670 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.23□□□□□ -1.89
RFX1P22670 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RFX1P22670 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RFX1P22670 RNU6-834P-201ENST00000362367 110 ntBASIC3.22□□□□□ -1.89
RFX1P22670 SNORA54-201ENST00000384281 123 ntBASIC3.22□□□□□ -1.89
RFX1P22670 Y_RNA.525-201ENST00000384570 113 ntBASIC3.22□□□□□ -1.89
RFX1P22670 RN7SKP200-201ENST00000410564 320 ntBASIC3.22□□□□□ -1.89
RFX1P22670 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.22□□□□□ -1.89
RFX1P22670 SNRPGP14-201ENST00000435400 219 ntBASIC3.22□□□□□ -1.89
RFX1P22670 HMGN2P32-201ENST00000444648 269 ntBASIC3.22□□□□□ -1.89
RFX1P22670 SNORD45.4-201ENST00000516629 73 ntBASIC3.22□□□□□ -1.89
RFX1P22670 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.22□□□□□ -1.89
RFX1P22670 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RFX1P22670 RNA5SP432-201ENST00000362480 116 ntBASIC3.21□□□□□ -1.9
RFX1P22670 RNU6-215P-201ENST00000365169 102 ntBASIC3.21□□□□□ -1.9
RFX1P22670 MIR518F-201ENST00000384973 87 ntBASIC3.21□□□□□ -1.9
RFX1P22670 SNORD77.3-201ENST00000391113 65 ntBASIC3.21□□□□□ -1.9
RFX1P22670 RNA5SP184-201ENST00000411071 108 ntBASIC3.21□□□□□ -1.9
RFX1P22670 AL158823.1-201ENST00000418441 478 ntBASIC3.21□□□□□ -1.9
RFX1P22670 AP004217.1-201ENST00000480579 346 ntBASIC3.21□□□□□ -1.9
RFX1P22670 SUB1P4-201ENST00000566062 339 ntBASIC3.21□□□□□ -1.9
RFX1P22670 MIR3945-201ENST00000581853 98 ntBASIC3.21□□□□□ -1.9
RFX1P22670 AC007318.2-201ENST00000620999 243 ntBASIC3.21□□□□□ -1.9
RFX1P22670 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RFX1P22670 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RFX1P22670 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RFX1P22670 RNU6-508P-201ENST00000363231 103 ntBASIC3.2□□□□□ -1.9
RFX1P22670 SNORA9.2-201ENST00000365361 133 ntBASIC3.2□□□□□ -1.9
RFX1P22670 RNU1-109P-201ENST00000383960 147 ntBASIC3.2□□□□□ -1.9
RFX1P22670 MIR1261-201ENST00000408659 82 ntBASIC3.2□□□□□ -1.9
RFX1P22670 AF228730.3-201ENST00000436691 102 ntBASIC3.2□□□□□ -1.9
RFX1P22670 MTATP6P21-201ENST00000440681 189 ntBASIC3.2□□□□□ -1.9
RFX1P22670 MIR4319-201ENST00000577285 85 ntBASIC3.2□□□□□ -1.9
RFX1P22670 AC027279.3-201ENST00000625055 122 ntBASIC3.2□□□□□ -1.9
RFX1P22670 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.2□□□□□ -1.9
RFX1P22670 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RFX1P22670 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
RFX1P22670 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFX1P22670 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RFX1P22670 RNU6-268P-201ENST00000364174 107 ntBASIC3.19□□□□□ -1.9
RFX1P22670 RNU1-51P-201ENST00000365345 176 ntBASIC3.19□□□□□ -1.9
RFX1P22670 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.19□□□□□ -1.9
RFX1P22670 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
RFX1P22670 SNORA31.10-201ENST00000516482 106 ntBASIC3.19□□□□□ -1.9
RFX1P22670 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.19□□□□□ -1.9
RFX1P22670 U1.36-201ENST00000620684 176 ntBASIC3.19□□□□□ -1.9
RFX1P22670 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFX1P22670 AC096644.4-201ENST00000563417 2912 ntBASIC3.19□□□□□ -1.9
RFX1P22670 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFX1P22670 AL161431.1-201ENST00000618966 4205 ntBASIC3.18□□□□□ -1.9
RFX1P22670 Y_RNA.410-201ENST00000383992 113 ntBASIC3.18□□□□□ -1.9
RFX1P22670 SNORA80E-201ENST00000384744 137 ntBASIC3.18□□□□□ -1.9
RFX1P22670 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RFX1P22670 MIR548O-201ENST00000408583 114 ntBASIC3.18□□□□□ -1.9
RFX1P22670 RNA5SP270-201ENST00000411361 118 ntBASIC3.18□□□□□ -1.9
RFX1P22670 AC105272.1-201ENST00000438604 198 ntBASIC3.18□□□□□ -1.9
RFX1P22670 STAG3L5P-204ENST00000443759 179 ntBASIC3.18□□□□□ -1.9
RFX1P22670 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.18□□□□□ -1.9
RFX1P22670 AL022345.2-201ENST00000606307 135 ntBASIC3.18□□□□□ -1.9
RFX1P22670 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.18□□□□□ -1.9
RFX1P22670 MTND5P32-201ENST00000560711 1802 ntBASIC3.18□□□□□ -1.9
RFX1P22670 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms