Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
ATP4AP20648 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATP4AP20648 FAM35CP-201ENST00000554755 2470 ntBASIC3.33□□□□□ -1.88
ATP4AP20648 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ATP4AP20648 AL035425.3-201ENST00000564206 4996 ntBASIC3.33□□□□□ -1.88
ATP4AP20648 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.33□□□□□ -1.88
ATP4AP20648 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.33□□□□□ -1.88
ATP4AP20648 SNORA19.1-201ENST00000410656 129 ntBASIC3.33□□□□□ -1.88
ATP4AP20648 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
ATP4AP20648 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
ATP4AP20648 RN7SL75P-201ENST00000461926 281 ntBASIC3.33□□□□□ -1.88
ATP4AP20648 RN7SKP12-201ENST00000516275 143 ntBASIC3.33□□□□□ -1.88
ATP4AP20648 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.33□□□□□ -1.88
ATP4AP20648 MALAT1.1-201ENST00000618249 95 ntBASIC3.33□□□□□ -1.88
ATP4AP20648 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.33□□□□□ -1.88
ATP4AP20648 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ATP4AP20648 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
ATP4AP20648 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
ATP4AP20648 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
ATP4AP20648 Y_RNA.37-201ENST00000362606 108 ntBASIC3.32□□□□□ -1.88
ATP4AP20648 Y_RNA.107-201ENST00000363190 121 ntBASIC3.32□□□□□ -1.88
ATP4AP20648 SNORD68-201ENST00000363214 84 ntBASIC3.32□□□□□ -1.88
ATP4AP20648 snoU2-30.1-201ENST00000365012 70 ntBASIC3.32□□□□□ -1.88
ATP4AP20648 Y_RNA.344-201ENST00000365381 112 ntBASIC3.32□□□□□ -1.88
ATP4AP20648 RNY1P7-201ENST00000384743 110 ntBASIC3.32□□□□□ -1.88
ATP4AP20648 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.32□□□□□ -1.88
ATP4AP20648 AL445646.1-201ENST00000431784 216 ntBASIC3.32□□□□□ -1.88
ATP4AP20648 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.32□□□□□ -1.88
ATP4AP20648 RNU6-638P-201ENST00000516582 104 ntBASIC3.32□□□□□ -1.88
ATP4AP20648 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.32□□□□□ -1.88
ATP4AP20648 U6.108-201ENST00000637764 58 ntBASIC3.32□□□□□ -1.88
ATP4AP20648 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.32□□□□□ -1.88
ATP4AP20648 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ATP4AP20648 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ATP4AP20648 MIR302B-201ENST00000362188 73 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 Y_RNA.93-201ENST00000363066 109 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 U8.5-201ENST00000364528 136 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 RNA5SP173-201ENST00000364857 136 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 RNU6-820P-201ENST00000384273 107 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 MIR450A2-201ENST00000385022 100 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 MIR634-201ENST00000385208 97 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 RNA5SP344-201ENST00000411081 104 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 AL135938.1-201ENST00000443141 297 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 RNU7-123P-201ENST00000515911 60 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 MIR4778-201ENST00000577635 80 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 MIR4762-201ENST00000585261 75 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 AL162726.3-218ENST00000636401 95 ntBASIC3.31□□□□□ -1.88
ATP4AP20648 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.31□□□□□ -1.88
ATP4AP20648 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP4AP20648 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATP4AP20648 RNU6-1084P-201ENST00000362498 107 ntBASIC3.3□□□□□ -1.88
ATP4AP20648 Y_RNA.265-201ENST00000364677 108 ntBASIC3.3□□□□□ -1.88
ATP4AP20648 Y_RNA.454-201ENST00000384224 113 ntBASIC3.3□□□□□ -1.88
ATP4AP20648 SNORA8-201ENST00000384574 139 ntBASIC3.3□□□□□ -1.88
ATP4AP20648 RPL39P25-201ENST00000449384 154 ntBASIC3.3□□□□□ -1.88
ATP4AP20648 RNU1-131P-201ENST00000458943 161 ntBASIC3.3□□□□□ -1.88
ATP4AP20648 RNU7-80P-201ENST00000459562 61 ntBASIC3.3□□□□□ -1.88
ATP4AP20648 AC023141.11-201ENST00000508864 202 ntBASIC3.3□□□□□ -1.88
ATP4AP20648 AC024995.1-201ENST00000523014 93 ntBASIC3.3□□□□□ -1.88
ATP4AP20648 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATP4AP20648 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
ATP4AP20648 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
ATP4AP20648 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ATP4AP20648 RNU4-36P-201ENST00000364294 144 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 SNORA63D-201ENST00000364359 132 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 Y_RNA.547-201ENST00000384654 119 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 MT-TI-201ENST00000387365 69 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 RNU6-1275P-201ENST00000391087 107 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 MIR1289-1-201ENST00000408836 144 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 MIR1912-201ENST00000410389 80 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 RNU2-48P-201ENST00000410694 191 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP4AP20648 ATP5J2P3-201ENST00000451550 258 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 RN7SL636P-201ENST00000497504 294 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 RN7SKP132-201ENST00000516001 208 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 SNORD36C-201ENST00000516733 66 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 SNORA18.7-201ENST00000516910 131 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 AC007536.1-201ENST00000533382 349 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 MIR3683-201ENST00000580847 82 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 MIR4305-201ENST00000583252 102 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 AL355297.2-201ENST00000604792 129 ntBASIC3.29□□□□□ -1.88
ATP4AP20648 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATP4AP20648 RNU6-268P-201ENST00000364174 107 ntBASIC3.28□□□□□ -1.88
ATP4AP20648 Y_RNA.336-201ENST00000365307 109 ntBASIC3.28□□□□□ -1.88
ATP4AP20648 Y_RNA.440-201ENST00000384120 114 ntBASIC3.28□□□□□ -1.88
ATP4AP20648 Y_RNA.510-201ENST00000384511 114 ntBASIC3.28□□□□□ -1.88
ATP4AP20648 MIR561-201ENST00000385216 97 ntBASIC3.28□□□□□ -1.88
ATP4AP20648 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.28□□□□□ -1.88
ATP4AP20648 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP4AP20648 SNORA59A-201ENST00000459326 152 ntBASIC3.28□□□□□ -1.88
ATP4AP20648 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP4AP20648 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.28□□□□□ -1.88
ATP4AP20648 MIR1245B-201ENST00000636115 69 ntBASIC3.28□□□□□ -1.88
ATP4AP20648 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
ATP4AP20648 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATP4AP20648 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.27□□□□□ -1.89
ATP4AP20648 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.27□□□□□ -1.89
ATP4AP20648 SRIP3-201ENST00000413200 219 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms