Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 RNU6-457P-201ENST00000363999 107 ntBASIC1.82□□□□□ -2.12
RXRAP19793 RNU6-203P-201ENST00000384038 104 ntBASIC1.82□□□□□ -2.12
RXRAP19793 RNU6-1248P-201ENST00000391096 64 ntBASIC1.82□□□□□ -2.12
RXRAP19793 AL034345.1-201ENST00000407768 123 ntBASIC1.82□□□□□ -2.12
RXRAP19793 RPS4XP11-201ENST00000446897 772 ntBASIC1.82□□□□□ -2.12
RXRAP19793 RNU7-34P-201ENST00000459394 64 ntBASIC1.82□□□□□ -2.12
RXRAP19793 RNA5SP458-201ENST00000516188 119 ntBASIC1.82□□□□□ -2.12
RXRAP19793 RNU6-1096P-201ENST00000517089 102 ntBASIC1.82□□□□□ -2.12
RXRAP19793 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.82□□□□□ -2.12
RXRAP19793 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.82□□□□□ -2.12
RXRAP19793 AC005972.2-201ENST00000604690 348 ntBASIC1.82□□□□□ -2.12
RXRAP19793 AC021506.2-201ENST00000612354 169 ntBASIC1.82□□□□□ -2.12
RXRAP19793 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.82□□□□□ -2.12
RXRAP19793 AC100821.1-201ENST00000523153 2479 ntBASIC1.82□□□□□ -2.12
RXRAP19793 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.81□□□□□ -2.12
RXRAP19793 MIR424-201ENST00000362227 98 ntBASIC1.81□□□□□ -2.12
RXRAP19793 RNU6-1123P-201ENST00000362347 106 ntBASIC1.81□□□□□ -2.12
RXRAP19793 SNORA1B-201ENST00000362535 133 ntBASIC1.81□□□□□ -2.12
RXRAP19793 Y_RNA.269-201ENST00000364685 89 ntBASIC1.81□□□□□ -2.12
RXRAP19793 Y_RNA.275-201ENST00000364726 110 ntBASIC1.81□□□□□ -2.12
RXRAP19793 RNU6-740P-201ENST00000364734 105 ntBASIC1.81□□□□□ -2.12
RXRAP19793 SNORD58.1-201ENST00000391313 66 ntBASIC1.81□□□□□ -2.12
RXRAP19793 MIR934-201ENST00000401241 83 ntBASIC1.81□□□□□ -2.12
RXRAP19793 RNU6-855P-201ENST00000410395 104 ntBASIC1.81□□□□□ -2.12
RXRAP19793 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.81□□□□□ -2.12
RXRAP19793 RNU4-71P-201ENST00000516258 113 ntBASIC1.81□□□□□ -2.12
RXRAP19793 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
RXRAP19793 MIR4643-201ENST00000577473 78 ntBASIC1.81□□□□□ -2.12
RXRAP19793 BX248123.2-201ENST00000606318 124 ntBASIC1.81□□□□□ -2.12
RXRAP19793 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.81□□□□□ -2.12
RXRAP19793 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.81□□□□□ -2.12
RXRAP19793 AC095038.3-201ENST00000634439 195 ntBASIC1.81□□□□□ -2.12
RXRAP19793 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RXRAP19793 RNY1-201ENST00000364228 113 ntBASIC1.8□□□□□ -2.12
RXRAP19793 Y_RNA.267-201ENST00000364679 109 ntBASIC1.8□□□□□ -2.12
RXRAP19793 Y_RNA.341-201ENST00000365341 102 ntBASIC1.8□□□□□ -2.12
RXRAP19793 RNU6-1323P-201ENST00000384025 107 ntBASIC1.8□□□□□ -2.12
RXRAP19793 RNU6-136P-201ENST00000384663 107 ntBASIC1.8□□□□□ -2.12
RXRAP19793 RNU2-14P-201ENST00000411053 191 ntBASIC1.8□□□□□ -2.12
RXRAP19793 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.8□□□□□ -2.12
RXRAP19793 RNU6-191P-201ENST00000516295 94 ntBASIC1.8□□□□□ -2.12
RXRAP19793 RNU6-1291P-201ENST00000516591 104 ntBASIC1.8□□□□□ -2.12
RXRAP19793 AL512605.2-201ENST00000592972 256 ntBASIC1.8□□□□□ -2.12
RXRAP19793 AC009779.6-201ENST00000603972 165 ntBASIC1.8□□□□□ -2.12
RXRAP19793 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.8□□□□□ -2.12
RXRAP19793 UBE2WP1-201ENST00000362030 340 ntBASIC1.79□□□□□ -2.12
RXRAP19793 Y_RNA.117-201ENST00000363294 101 ntBASIC1.79□□□□□ -2.12
RXRAP19793 RNU4-13P-201ENST00000364019 141 ntBASIC1.79□□□□□ -2.12
RXRAP19793 RNU1-42P-201ENST00000364033 160 ntBASIC1.79□□□□□ -2.12
RXRAP19793 RNU6-662P-201ENST00000384253 104 ntBASIC1.79□□□□□ -2.12
RXRAP19793 RNA5SP482-201ENST00000391269 118 ntBASIC1.79□□□□□ -2.12
RXRAP19793 AC004965.1-201ENST00000413033 213 ntBASIC1.79□□□□□ -2.12
RXRAP19793 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.79□□□□□ -2.12
RXRAP19793 AL135790.2-201ENST00000437701 267 ntBASIC1.79□□□□□ -2.12
RXRAP19793 snoU13.9-201ENST00000458927 103 ntBASIC1.79□□□□□ -2.12
RXRAP19793 OR9P1P-201ENST00000496431 281 ntBASIC1.79□□□□□ -2.12
RXRAP19793 SNORA27.4-201ENST00000516650 95 ntBASIC1.79□□□□□ -2.12
RXRAP19793 RNU2-56P-201ENST00000516826 190 ntBASIC1.79□□□□□ -2.12
RXRAP19793 AL513423.1-201ENST00000621695 132 ntBASIC1.79□□□□□ -2.12
RXRAP19793 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
RXRAP19793 MIR302D-201ENST00000362275 68 ntBASIC1.78□□□□□ -2.12
RXRAP19793 Y_RNA.76-201ENST00000362931 109 ntBASIC1.78□□□□□ -2.12
RXRAP19793 RNU6-200P-201ENST00000364743 107 ntBASIC1.78□□□□□ -2.12
RXRAP19793 RNU6-1289P-201ENST00000384431 106 ntBASIC1.78□□□□□ -2.12
RXRAP19793 MT-TR-201ENST00000387439 65 ntBASIC1.78□□□□□ -2.12
RXRAP19793 MIR1304-201ENST00000408243 91 ntBASIC1.78□□□□□ -2.12
RXRAP19793 Y_RNA.590-201ENST00000410140 107 ntBASIC1.78□□□□□ -2.12
RXRAP19793 RNU6-651P-201ENST00000411040 105 ntBASIC1.78□□□□□ -2.12
RXRAP19793 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.78□□□□□ -2.12
RXRAP19793 Z98949.2-201ENST00000440996 144 ntBASIC1.78□□□□□ -2.12
RXRAP19793 PGBD4P5-201ENST00000445958 426 ntBASIC1.78□□□□□ -2.12
RXRAP19793 AC005908.1-201ENST00000468701 347 ntBASIC1.78□□□□□ -2.12
RXRAP19793 RNU6-138P-201ENST00000515952 107 ntBASIC1.78□□□□□ -2.12
RXRAP19793 Y_RNA.679-201ENST00000516416 91 ntBASIC1.78□□□□□ -2.12
RXRAP19793 AC136628.3-201ENST00000521868 290 ntBASIC1.78□□□□□ -2.12
RXRAP19793 AC130289.1-201ENST00000577321 73 ntBASIC1.78□□□□□ -2.12
RXRAP19793 AC015688.6-201ENST00000577737 104 ntBASIC1.78□□□□□ -2.12
RXRAP19793 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RXRAP19793 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RXRAP19793 Y_RNA.217-201ENST00000364214 105 ntBASIC1.77□□□□□ -2.13
RXRAP19793 SNORA72-201ENST00000384339 132 ntBASIC1.77□□□□□ -2.13
RXRAP19793 STAG3L5P-204ENST00000443759 179 ntBASIC1.77□□□□□ -2.13
RXRAP19793 U8.19-201ENST00000459095 133 ntBASIC1.77□□□□□ -2.13
RXRAP19793 Y_RNA.641-201ENST00000459414 105 ntBASIC1.77□□□□□ -2.13
RXRAP19793 AL049830.1-201ENST00000468034 425 ntBASIC1.77□□□□□ -2.13
RXRAP19793 RNU7-116P-201ENST00000516940 62 ntBASIC1.77□□□□□ -2.13
RXRAP19793 AC011604.1-201ENST00000545978 196 ntBASIC1.77□□□□□ -2.13
RXRAP19793 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.77□□□□□ -2.13
RXRAP19793 AL442067.1-201ENST00000613261 223 ntBASIC1.77□□□□□ -2.13
RXRAP19793 AC073349.3-201ENST00000617616 186 ntBASIC1.77□□□□□ -2.13
RXRAP19793 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
RXRAP19793 Y_RNA.82-201ENST00000363000 102 ntBASIC1.76□□□□□ -2.13
RXRAP19793 Y_RNA.92-201ENST00000363043 102 ntBASIC1.76□□□□□ -2.13
RXRAP19793 Y_RNA.122-201ENST00000363331 96 ntBASIC1.76□□□□□ -2.13
RXRAP19793 Y_RNA.200-201ENST00000364018 102 ntBASIC1.76□□□□□ -2.13
RXRAP19793 Y_RNA.235-201ENST00000364412 102 ntBASIC1.76□□□□□ -2.13
RXRAP19793 Y_RNA.265-201ENST00000364677 108 ntBASIC1.76□□□□□ -2.13
RXRAP19793 Y_RNA.274-201ENST00000364714 101 ntBASIC1.76□□□□□ -2.13
RXRAP19793 RNU6-60P-201ENST00000364792 103 ntBASIC1.76□□□□□ -2.13
RXRAP19793 Y_RNA.306-201ENST00000365015 102 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 256.7 ms