Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RNA5SP402-201ENST00000517148 110 ntBASIC2.5□□□□□ -2.01
PTPN1P18031 AC005786.1-201ENST00000588553 154 ntBASIC2.5□□□□□ -2.01
PTPN1P18031 AC097639.2-201ENST00000603159 172 ntBASIC2.5□□□□□ -2.01
PTPN1P18031 Pinc.1-201ENST00000616452 154 ntBASIC2.5□□□□□ -2.01
PTPN1P18031 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.5□□□□□ -2.01
PTPN1P18031 AC022513.1-201ENST00000624512 117 ntBASIC2.5□□□□□ -2.01
PTPN1P18031 SNORA1B-201ENST00000362535 133 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 Y_RNA.91-201ENST00000363042 107 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 RNU6-978P-201ENST00000364371 103 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 Y_RNA.634-201ENST00000364811 113 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 RNU6-1117P-201ENST00000384525 104 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 SNORA20-201ENST00000384662 132 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 RNU6-959P-201ENST00000384671 107 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 RNU6-588P-201ENST00000410281 105 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 BX510359.4-201ENST00000423750 193 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 RNU7-197P-201ENST00000458836 62 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 NDUFA4P2-201ENST00000489989 244 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 MIR4658-201ENST00000584344 65 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.49□□□□□ -2.01
PTPN1P18031 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
PTPN1P18031 SNORA25.7-201ENST00000364375 127 ntBASIC2.48□□□□□ -2.01
PTPN1P18031 Y_RNA.420-201ENST00000384043 110 ntBASIC2.48□□□□□ -2.01
PTPN1P18031 SNORA12.1-201ENST00000390873 148 ntBASIC2.48□□□□□ -2.01
PTPN1P18031 AC245047.4-201ENST00000433189 144 ntBASIC2.48□□□□□ -2.01
PTPN1P18031 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.48□□□□□ -2.01
PTPN1P18031 AL049830.1-201ENST00000468034 425 ntBASIC2.48□□□□□ -2.01
PTPN1P18031 AC092991.1-201ENST00000477176 376 ntBASIC2.48□□□□□ -2.01
PTPN1P18031 RNA5SP281-201ENST00000516504 135 ntBASIC2.48□□□□□ -2.01
PTPN1P18031 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
PTPN1P18031 RNU1-104P-201ENST00000517280 175 ntBASIC2.48□□□□□ -2.01
PTPN1P18031 MIR548AI-201ENST00000579940 88 ntBASIC2.48□□□□□ -2.01
PTPN1P18031 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.48□□□□□ -2.01
PTPN1P18031 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTPN1P18031 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTPN1P18031 MIR126-201ENST00000362291 85 ntBASIC2.47□□□□□ -2.01
PTPN1P18031 RNU6-1082P-201ENST00000364574 107 ntBASIC2.47□□□□□ -2.01
PTPN1P18031 RNU6-1081P-201ENST00000384537 107 ntBASIC2.47□□□□□ -2.01
PTPN1P18031 AC007064.1-201ENST00000412238 351 ntBASIC2.47□□□□□ -2.01
PTPN1P18031 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PTPN1P18031 MTND4LP9-201ENST00000427694 174 ntBASIC2.47□□□□□ -2.01
PTPN1P18031 RNU2-56P-201ENST00000516826 190 ntBASIC2.47□□□□□ -2.01
PTPN1P18031 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.47□□□□□ -2.01
PTPN1P18031 AC007336.1-201ENST00000576365 3828 ntBASIC2.47□□□□□ -2.01
PTPN1P18031 MIR5007-201ENST00000583098 95 ntBASIC2.47□□□□□ -2.01
PTPN1P18031 AL591926.4-201ENST00000616895 298 ntBASIC2.47□□□□□ -2.01
PTPN1P18031 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTPN1P18031 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTPN1P18031 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PTPN1P18031 Y_RNA.486-201ENST00000384398 107 ntBASIC2.46□□□□□ -2.02
PTPN1P18031 SNORA3.2-201ENST00000408221 125 ntBASIC2.46□□□□□ -2.02
PTPN1P18031 MRPS17P9-201ENST00000511924 393 ntBASIC2.46□□□□□ -2.02
PTPN1P18031 RNU1-41P-201ENST00000516161 162 ntBASIC2.46□□□□□ -2.02
PTPN1P18031 RNU1-48P-201ENST00000516400 162 ntBASIC2.46□□□□□ -2.02
PTPN1P18031 Y_RNA.714-201ENST00000517065 90 ntBASIC2.46□□□□□ -2.02
PTPN1P18031 AC090142.3-201ENST00000519012 385 ntBASIC2.46□□□□□ -2.02
PTPN1P18031 AC022217.4-201ENST00000604389 163 ntBASIC2.46□□□□□ -2.02
PTPN1P18031 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.46□□□□□ -2.02
PTPN1P18031 AC064859.1-201ENST00000624741 174 ntBASIC2.46□□□□□ -2.02
PTPN1P18031 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.46□□□□□ -2.02
PTPN1P18031 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PTPN1P18031 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PTPN1P18031 RNU6-1336P-201ENST00000383886 109 ntBASIC2.45□□□□□ -2.02
PTPN1P18031 RNU6-460P-201ENST00000391158 108 ntBASIC2.45□□□□□ -2.02
PTPN1P18031 MLLT10P1-201ENST00000418346 262 ntBASIC2.45□□□□□ -2.02
PTPN1P18031 CYCSP49-201ENST00000420810 319 ntBASIC2.45□□□□□ -2.02
PTPN1P18031 AC245047.3-201ENST00000429428 127 ntBASIC2.45□□□□□ -2.02
PTPN1P18031 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.45□□□□□ -2.02
PTPN1P18031 RNU6-62P-201ENST00000516526 102 ntBASIC2.45□□□□□ -2.02
PTPN1P18031 RNU6-365P-201ENST00000517113 106 ntBASIC2.45□□□□□ -2.02
PTPN1P18031 AC087685.1-201ENST00000587507 141 ntBASIC2.45□□□□□ -2.02
PTPN1P18031 AC069114.2-201ENST00000604699 304 ntBASIC2.45□□□□□ -2.02
PTPN1P18031 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.45□□□□□ -2.02
PTPN1P18031 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PTPN1P18031 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PTPN1P18031 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
PTPN1P18031 RNY1P11-201ENST00000363759 113 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 Y_RNA.251-201ENST00000364551 99 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 SNORA67.1-201ENST00000364749 141 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 RNU1-51P-201ENST00000365345 176 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 RNU6-22P-201ENST00000384355 107 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 Y_RNA.542-201ENST00000384641 111 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 SNORA80E-201ENST00000384744 137 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 MIR597-201ENST00000384968 97 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 MIR522-201ENST00000385071 87 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 Z98742.3-201ENST00000418637 326 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.44□□□□□ -2.02
PTPN1P18031 AC008507.4-201ENST00000585464 127 ntBASIC2.44□□□□□ -2.02
PTPN1P18031 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.43□□□□□ -2.02
PTPN1P18031 Y_RNA.242-201ENST00000364473 110 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 SNORA70B-201ENST00000384210 135 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PTPN1P18031 SNORD72-201ENST00000390994 80 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 RNA5SP109-201ENST00000391010 116 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 RNU11-3P-201ENST00000391111 133 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 MIR1261-201ENST00000408659 82 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 FTH1P12-201ENST00000432137 551 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 AL606517.2-201ENST00000442855 241 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 RNU6-971P-201ENST00000516920 106 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 TUG1_4.1-201ENST00000619464 181 ntBASIC2.43□□□□□ -2.02
PTPN1P18031 AP001340.1-201ENST00000624405 217 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms