Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 AC079140.2-201ENST00000506193 142 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 MRPS35P2-201ENST00000508242 191 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 RNU6-496P-201ENST00000516145 99 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.54□□□□□ -2.16
ACTN1P12814 MIR3937-201ENST00000580135 106 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 AL355297.3-201ENST00000604082 446 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 AC005972.2-201ENST00000604690 348 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 AL365434.2-201ENST00000607979 234 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ACTN1P12814 MIR302D-201ENST00000362275 68 ntBASIC1.53□□□□□ -2.16
ACTN1P12814 RNU6-1123P-201ENST00000362347 106 ntBASIC1.53□□□□□ -2.16
ACTN1P12814 RNU6-770P-201ENST00000363929 105 ntBASIC1.53□□□□□ -2.16
ACTN1P12814 RNU6-1048P-201ENST00000364054 107 ntBASIC1.53□□□□□ -2.16
ACTN1P12814 MIR7-2-201ENST00000384970 110 ntBASIC1.53□□□□□ -2.16
ACTN1P12814 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.53□□□□□ -2.16
ACTN1P12814 RNU6-985P-201ENST00000410182 104 ntBASIC1.53□□□□□ -2.16
ACTN1P12814 RNU6-1116P-201ENST00000517269 99 ntBASIC1.53□□□□□ -2.16
ACTN1P12814 AL162424.1-201ENST00000602325 221 ntBASIC1.53□□□□□ -2.16
ACTN1P12814 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.53□□□□□ -2.16
ACTN1P12814 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
ACTN1P12814 Y_RNA.310-201ENST00000365063 113 ntBASIC1.52□□□□□ -2.17
ACTN1P12814 MLLT10P1-201ENST00000418346 262 ntBASIC1.52□□□□□ -2.17
ACTN1P12814 AC117454.1-201ENST00000491120 168 ntBASIC1.52□□□□□ -2.17
ACTN1P12814 AL513423.1-201ENST00000621695 132 ntBASIC1.52□□□□□ -2.17
ACTN1P12814 RNU4-90P-201ENST00000362773 141 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 SNORA63-201ENST00000363450 132 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 Y_RNA.152-201ENST00000363578 100 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 Y_RNA.418-201ENST00000384029 102 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 RNU6-424P-201ENST00000384367 105 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 Y_RNA.569-201ENST00000384749 103 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 MIR660-201ENST00000385235 97 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 RNA5SP482-201ENST00000391269 118 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 Z98949.2-201ENST00000440996 144 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 MTND5P22-201ENST00000458380 195 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 MTATP8P1-201ENST00000467115 207 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 HMGN1P10-201ENST00000474557 553 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 RNU7-12P-201ENST00000516030 62 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 RNU7-28P-201ENST00000516759 62 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.51□□□□□ -2.17
ACTN1P12814 PRR13P7-201ENST00000605538 430 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.51□□□□□ -2.17
ACTN1P12814 AL591926.4-201ENST00000616895 298 ntBASIC1.51□□□□□ -2.17
ACTN1P12814 snoU2_19.2-201ENST00000363024 80 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 RNY1-201ENST00000364228 113 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 Y_RNA.326-201ENST00000365176 113 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 Y_RNA.368-201ENST00000365547 113 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 Y_RNA.456-201ENST00000384232 111 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 RNU6-1011P-201ENST00000384668 107 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 PIGPP3-201ENST00000425307 415 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.5□□□□□ -2.17
ACTN1P12814 RPS29P29-201ENST00000456396 171 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 AP003733.2-201ENST00000529409 171 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 POLR3GP1-201ENST00000594073 261 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 AC134026.1-201ENST00000623249 2239 ntBASIC1.5□□□□□ -2.17
ACTN1P12814 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
ACTN1P12814 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ACTN1P12814 Y_RNA.222-201ENST00000364264 102 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 U8.7-201ENST00000364940 136 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 Y_RNA.512-201ENST00000384518 102 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 Y_RNA.541-201ENST00000384640 113 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 Y_RNA.581-201ENST00000391017 97 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 RNU2-14P-201ENST00000411053 191 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 RPS27P16-201ENST00000425758 201 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 AC092991.1-201ENST00000477176 376 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 RNU6-191P-201ENST00000516295 94 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 AC024405.2-202ENST00000532731 184 ntBASIC1.49□□□□□ -2.17
ACTN1P12814 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
ACTN1P12814 Y_RNA.16-201ENST00000362421 102 ntBASIC1.48□□□□□ -2.17
ACTN1P12814 Y_RNA.253-201ENST00000364562 112 ntBASIC1.48□□□□□ -2.17
ACTN1P12814 SNORA72-201ENST00000384339 132 ntBASIC1.48□□□□□ -2.17
ACTN1P12814 RNU6-163P-201ENST00000384396 106 ntBASIC1.48□□□□□ -2.17
ACTN1P12814 AC027119.1-201ENST00000440877 241 ntBASIC1.48□□□□□ -2.17
ACTN1P12814 DYNLT3P2-201ENST00000442517 295 ntBASIC1.48□□□□□ -2.17
ACTN1P12814 RPL23AP54-201ENST00000495129 419 ntBASIC1.48□□□□□ -2.17
ACTN1P12814 RNU6-570P-201ENST00000517051 105 ntBASIC1.48□□□□□ -2.17
ACTN1P12814 AL358944.1-201ENST00000528537 144 ntBASIC1.48□□□□□ -2.17
ACTN1P12814 AC006504.6-201ENST00000590142 199 ntBASIC1.48□□□□□ -2.17
ACTN1P12814 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
ACTN1P12814 MIRLET7C-201ENST00000362160 84 ntBASIC1.47□□□□□ -2.17
ACTN1P12814 RNU6-290P-201ENST00000365212 101 ntBASIC1.47□□□□□ -2.17
ACTN1P12814 MTCO2P33-201ENST00000402100 465 ntBASIC1.47□□□□□ -2.17
ACTN1P12814 SNX2P2-201ENST00000424553 323 ntBASIC1.47□□□□□ -2.17
ACTN1P12814 MTCO1P5-201ENST00000433573 344 ntBASIC1.47□□□□□ -2.17
ACTN1P12814 AC104332.1-201ENST00000440471 797 ntBASIC1.47□□□□□ -2.17
ACTN1P12814 RNU6-922P-201ENST00000516753 99 ntBASIC1.47□□□□□ -2.17
ACTN1P12814 AC068338.1-201ENST00000565567 176 ntBASIC1.47□□□□□ -2.17
ACTN1P12814 MIR548AY-201ENST00000617669 107 ntBASIC1.47□□□□□ -2.17
ACTN1P12814 RNU6-238P-201ENST00000363313 106 ntBASIC1.46□□□□□ -2.18
ACTN1P12814 Y_RNA.276-201ENST00000364732 109 ntBASIC1.46□□□□□ -2.18
ACTN1P12814 RNU6-1323P-201ENST00000384025 107 ntBASIC1.46□□□□□ -2.18
ACTN1P12814 RNU6-1065P-201ENST00000384513 106 ntBASIC1.46□□□□□ -2.18
ACTN1P12814 Y_RNA.540-201ENST00000384638 111 ntBASIC1.46□□□□□ -2.18
ACTN1P12814 RNU6-1105P-201ENST00000384774 107 ntBASIC1.46□□□□□ -2.18
ACTN1P12814 MIR606-201ENST00000384851 96 ntBASIC1.46□□□□□ -2.18
ACTN1P12814 RPL30P13-201ENST00000418873 348 ntBASIC1.46□□□□□ -2.18
ACTN1P12814 RNU7-141P-201ENST00000459304 62 ntBASIC1.46□□□□□ -2.18
ACTN1P12814 RNU6-635P-201ENST00000516651 102 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms