Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MLLT10P1-201ENST00000418346 262 ntBASIC1.66□□□□□ -2.14
PCNAP12004 JTBP1-201ENST00000441314 247 ntBASIC1.66□□□□□ -2.14
PCNAP12004 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.66□□□□□ -2.14
PCNAP12004 MIR5692C2-201ENST00000577959 77 ntBASIC1.66□□□□□ -2.14
PCNAP12004 SNORA77B-201ENST00000578179 125 ntBASIC1.66□□□□□ -2.14
PCNAP12004 AL162424.1-201ENST00000602325 221 ntBASIC1.66□□□□□ -2.14
PCNAP12004 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.66□□□□□ -2.14
PCNAP12004 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.66□□□□□ -2.14
PCNAP12004 MIR126-201ENST00000362291 85 ntBASIC1.65□□□□□ -2.15
PCNAP12004 Y_RNA.60-201ENST00000362831 98 ntBASIC1.65□□□□□ -2.15
PCNAP12004 RNU6-1205P-201ENST00000363625 106 ntBASIC1.65□□□□□ -2.15
PCNAP12004 Y_RNA.293-201ENST00000364908 93 ntBASIC1.65□□□□□ -2.15
PCNAP12004 Y_RNA.350-201ENST00000365409 98 ntBASIC1.65□□□□□ -2.15
PCNAP12004 Y_RNA.352-201ENST00000365439 102 ntBASIC1.65□□□□□ -2.15
PCNAP12004 MIR194-1-201ENST00000384892 85 ntBASIC1.65□□□□□ -2.15
PCNAP12004 AC093850.1-201ENST00000454121 251 ntBASIC1.65□□□□□ -2.15
PCNAP12004 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.65□□□□□ -2.15
PCNAP12004 RNU6-437P-201ENST00000459408 95 ntBASIC1.65□□□□□ -2.15
PCNAP12004 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.65□□□□□ -2.15
PCNAP12004 RNA5SP168-201ENST00000516642 112 ntBASIC1.65□□□□□ -2.15
PCNAP12004 AL358944.1-201ENST00000528537 144 ntBASIC1.65□□□□□ -2.15
PCNAP12004 MIR4778-201ENST00000577635 80 ntBASIC1.65□□□□□ -2.15
PCNAP12004 SNORA28-201ENST00000606769 126 ntBASIC1.65□□□□□ -2.15
PCNAP12004 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PCNAP12004 MIRLET7C-201ENST00000362160 84 ntBASIC1.64□□□□□ -2.15
PCNAP12004 Y_RNA.76-201ENST00000362931 109 ntBASIC1.64□□□□□ -2.15
PCNAP12004 Y_RNA.447-201ENST00000384184 113 ntBASIC1.64□□□□□ -2.15
PCNAP12004 Y_RNA.572-201ENST00000384757 98 ntBASIC1.64□□□□□ -2.15
PCNAP12004 RNA5SP482-201ENST00000391269 118 ntBASIC1.64□□□□□ -2.15
PCNAP12004 Y_RNA.590-201ENST00000410140 107 ntBASIC1.64□□□□□ -2.15
PCNAP12004 AL161935.2-201ENST00000414627 60 ntBASIC1.64□□□□□ -2.15
PCNAP12004 PIGPP3-201ENST00000425307 415 ntBASIC1.64□□□□□ -2.15
PCNAP12004 PGBD4P5-201ENST00000445958 426 ntBASIC1.64□□□□□ -2.15
PCNAP12004 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.64□□□□□ -2.15
PCNAP12004 SNORD116-28-201ENST00000516123 91 ntBASIC1.64□□□□□ -2.15
PCNAP12004 SUMO2P16-201ENST00000519475 264 ntBASIC1.64□□□□□ -2.15
PCNAP12004 MIR6845-201ENST00000613182 61 ntBASIC1.64□□□□□ -2.15
PCNAP12004 Y_RNA.65-201ENST00000362846 100 ntBASIC1.63□□□□□ -2.15
PCNAP12004 Y_RNA.122-201ENST00000363331 96 ntBASIC1.63□□□□□ -2.15
PCNAP12004 Y_RNA.416-201ENST00000384014 113 ntBASIC1.63□□□□□ -2.15
PCNAP12004 RNU6-424P-201ENST00000384367 105 ntBASIC1.63□□□□□ -2.15
PCNAP12004 Y_RNA.539-201ENST00000384635 107 ntBASIC1.63□□□□□ -2.15
PCNAP12004 MIR30A-201ENST00000385092 71 ntBASIC1.63□□□□□ -2.15
PCNAP12004 U8.13-201ENST00000390842 128 ntBASIC1.63□□□□□ -2.15
PCNAP12004 MIR548H3-201ENST00000408771 118 ntBASIC1.63□□□□□ -2.15
PCNAP12004 AC004965.1-201ENST00000413033 213 ntBASIC1.63□□□□□ -2.15
PCNAP12004 HMGN1P7-201ENST00000491722 313 ntBASIC1.63□□□□□ -2.15
PCNAP12004 Y_RNA.679-201ENST00000516416 91 ntBASIC1.63□□□□□ -2.15
PCNAP12004 RNU6-295P-201ENST00000516901 104 ntBASIC1.63□□□□□ -2.15
PCNAP12004 AC073349.3-201ENST00000617616 186 ntBASIC1.63□□□□□ -2.15
PCNAP12004 MIR8063-201ENST00000621930 81 ntBASIC1.63□□□□□ -2.15
PCNAP12004 RNU6-1209P-201ENST00000363655 107 ntBASIC1.62□□□□□ -2.15
PCNAP12004 Y_RNA.796-201ENST00000364268 102 ntBASIC1.62□□□□□ -2.15
PCNAP12004 Y_RNA.799-201ENST00000364992 102 ntBASIC1.62□□□□□ -2.15
PCNAP12004 MIR522-201ENST00000385071 87 ntBASIC1.62□□□□□ -2.15
PCNAP12004 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.62□□□□□ -2.15
PCNAP12004 FTH1P12-201ENST00000432137 551 ntBASIC1.62□□□□□ -2.15
PCNAP12004 SNRPGP10-201ENST00000432323 225 ntBASIC1.62□□□□□ -2.15
PCNAP12004 SNORD2.1-201ENST00000458762 69 ntBASIC1.62□□□□□ -2.15
PCNAP12004 RNU7-28P-201ENST00000516759 62 ntBASIC1.62□□□□□ -2.15
PCNAP12004 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.62□□□□□ -2.15
PCNAP12004 AC004817.2-201ENST00000561794 651 ntBASIC1.62□□□□□ -2.15
PCNAP12004 MIR3945-201ENST00000581853 98 ntBASIC1.62□□□□□ -2.15
PCNAP12004 AC106754.2-201ENST00000623006 233 ntBASIC1.62□□□□□ -2.15
PCNAP12004 SNORD3E-202ENST00000627253 216 ntBASIC1.62□□□□□ -2.15
PCNAP12004 ICE2P2-201ENST00000483823 2787 ntBASIC1.62□□□□□ -2.15
PCNAP12004 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.82-201ENST00000363000 102 ntBASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.92-201ENST00000363043 102 ntBASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.235-201ENST00000364412 102 ntBASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.269-201ENST00000364685 89 ntBASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.306-201ENST00000365015 102 ntBASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.312-201ENST00000365089 102 ntBASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.322-201ENST00000365151 102 ntBASIC1.61□□□□□ -2.15
PCNAP12004 HSPE1P24-201ENST00000450782 238 ntBASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.650-201ENST00000459002 102 ntBASIC1.61□□□□□ -2.15
PCNAP12004 RN7SL429P-201ENST00000479090 223 ntBASIC1.61□□□□□ -2.15
PCNAP12004 RN7SL489P-201ENST00000486185 223 ntBASIC1.61□□□□□ -2.15
PCNAP12004 RN7SL327P-201ENST00000488659 223 ntBASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.777-201ENST00000516982 102 ntBASIC1.61□□□□□ -2.15
PCNAP12004 RPL23AP91-201ENST00000569211 455 ntBASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.771-201ENST00000598668 102 ntBASIC1.61□□□□□ -2.15
PCNAP12004 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.61□□□□□ -2.15
PCNAP12004 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.61□□□□□ -2.15
PCNAP12004 RN7SL853P-201ENST00000617250 223 ntBASIC1.61□□□□□ -2.15
PCNAP12004 Y_RNA.789-201ENST00000622480 102 ntBASIC1.61□□□□□ -2.15
PCNAP12004 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
PCNAP12004 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PCNAP12004 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PCNAP12004 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PCNAP12004 RNA5SP259-201ENST00000365541 109 ntBASIC1.6□□□□□ -2.15
PCNAP12004 MIR513A1-201ENST00000385138 129 ntBASIC1.6□□□□□ -2.15
PCNAP12004 MIR660-201ENST00000385235 97 ntBASIC1.6□□□□□ -2.15
PCNAP12004 RN7SKP51-201ENST00000410781 304 ntBASIC1.6□□□□□ -2.15
PCNAP12004 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.6□□□□□ -2.15
PCNAP12004 snoU13.9-201ENST00000458927 103 ntBASIC1.6□□□□□ -2.15
PCNAP12004 NDUFA4P2-201ENST00000489989 244 ntBASIC1.6□□□□□ -2.15
PCNAP12004 AC114811.1-201ENST00000507207 168 ntBASIC1.6□□□□□ -2.15
PCNAP12004 RNU7-12P-201ENST00000516030 62 ntBASIC1.6□□□□□ -2.15
PCNAP12004 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms