Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 Y_RNA.416-201ENST00000384014 113 ntBASIC1.68□□□□□ -2.14
MMP2P08253 RNU6-1031P-201ENST00000384773 107 ntBASIC1.68□□□□□ -2.14
MMP2P08253 Y_RNA.618-201ENST00000410949 107 ntBASIC1.68□□□□□ -2.14
MMP2P08253 BTF3P11-201ENST00000426582 477 ntBASIC1.68□□□□□ -2.14
MMP2P08253 MIR3683-201ENST00000580847 82 ntBASIC1.68□□□□□ -2.14
MMP2P08253 MIR4285-201ENST00000581001 85 ntBASIC1.68□□□□□ -2.14
MMP2P08253 AC012493.3-201ENST00000604494 112 ntBASIC1.68□□□□□ -2.14
MMP2P08253 AP003357.1-201ENST00000604497 148 ntBASIC1.68□□□□□ -2.14
MMP2P08253 MIR8074-201ENST00000615081 81 ntBASIC1.68□□□□□ -2.14
MMP2P08253 AL078604.3-201ENST00000615580 211 ntBASIC1.68□□□□□ -2.14
MMP2P08253 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.68□□□□□ -2.14
MMP2P08253 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
MMP2P08253 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.67□□□□□ -2.14
MMP2P08253 RNU6-899P-201ENST00000363947 107 ntBASIC1.67□□□□□ -2.14
MMP2P08253 Y_RNA.277-201ENST00000364754 102 ntBASIC1.67□□□□□ -2.14
MMP2P08253 RNU6-1289P-201ENST00000384431 106 ntBASIC1.67□□□□□ -2.14
MMP2P08253 Y_RNA.539-201ENST00000384635 107 ntBASIC1.67□□□□□ -2.14
MMP2P08253 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
MMP2P08253 AL034345.1-201ENST00000407768 123 ntBASIC1.67□□□□□ -2.14
MMP2P08253 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.67□□□□□ -2.14
MMP2P08253 FTH1P12-201ENST00000432137 551 ntBASIC1.67□□□□□ -2.14
MMP2P08253 RNU6-1023P-201ENST00000516137 106 ntBASIC1.67□□□□□ -2.14
MMP2P08253 RNU6-1271P-201ENST00000517049 105 ntBASIC1.67□□□□□ -2.14
MMP2P08253 AC127455.1-201ENST00000565496 145 ntBASIC1.67□□□□□ -2.14
MMP2P08253 SNORA28-201ENST00000606769 126 ntBASIC1.67□□□□□ -2.14
MMP2P08253 AL008718.3-201ENST00000610217 321 ntBASIC1.67□□□□□ -2.14
MMP2P08253 snoU18.1-201ENST00000629629 71 ntBASIC1.67□□□□□ -2.14
MMP2P08253 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MMP2P08253 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
MMP2P08253 AC068700.1-201ENST00000565862 3754 ntBASIC1.66□□□□□ -2.14
MMP2P08253 MIR424-201ENST00000362227 98 ntBASIC1.66□□□□□ -2.14
MMP2P08253 Y_RNA.20-201ENST00000362479 113 ntBASIC1.66□□□□□ -2.14
MMP2P08253 Y_RNA.188-201ENST00000363952 111 ntBASIC1.66□□□□□ -2.14
MMP2P08253 RNA5SP99-201ENST00000364020 114 ntBASIC1.66□□□□□ -2.14
MMP2P08253 RNU4-41P-201ENST00000364426 143 ntBASIC1.66□□□□□ -2.14
MMP2P08253 RNU6-338P-201ENST00000383888 105 ntBASIC1.66□□□□□ -2.14
MMP2P08253 MT-TG-201ENST00000387429 68 ntBASIC1.66□□□□□ -2.14
MMP2P08253 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.66□□□□□ -2.14
MMP2P08253 SNORA36B-201ENST00000410438 131 ntBASIC1.66□□□□□ -2.14
MMP2P08253 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.66□□□□□ -2.14
MMP2P08253 RNU7-28P-201ENST00000516759 62 ntBASIC1.66□□□□□ -2.14
MMP2P08253 AC005357.1-201ENST00000588399 301 ntBASIC1.66□□□□□ -2.14
MMP2P08253 AL162424.1-201ENST00000602325 221 ntBASIC1.66□□□□□ -2.14
MMP2P08253 AC021506.2-201ENST00000612354 169 ntBASIC1.66□□□□□ -2.14
MMP2P08253 RNU6-203P-201ENST00000384038 104 ntBASIC1.65□□□□□ -2.15
MMP2P08253 SNORA12.1-201ENST00000390873 148 ntBASIC1.65□□□□□ -2.15
MMP2P08253 RNA5SP482-201ENST00000391269 118 ntBASIC1.65□□□□□ -2.15
MMP2P08253 MIR1267-201ENST00000408723 78 ntBASIC1.65□□□□□ -2.15
MMP2P08253 JTBP1-201ENST00000441314 247 ntBASIC1.65□□□□□ -2.15
MMP2P08253 SNORD2.1-201ENST00000458762 69 ntBASIC1.65□□□□□ -2.15
MMP2P08253 AC099513.1-201ENST00000490423 301 ntBASIC1.65□□□□□ -2.15
MMP2P08253 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
MMP2P08253 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.65□□□□□ -2.15
MMP2P08253 AC006006.1-201ENST00000603082 144 ntBASIC1.65□□□□□ -2.15
MMP2P08253 AC013791.1-201ENST00000616619 62 ntBASIC1.65□□□□□ -2.15
MMP2P08253 AC095038.3-201ENST00000634439 195 ntBASIC1.65□□□□□ -2.15
MMP2P08253 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.76-201ENST00000362931 109 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.82-201ENST00000363000 102 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.92-201ENST00000363043 102 ntBASIC1.64□□□□□ -2.15
MMP2P08253 RNU6-1205P-201ENST00000363625 106 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.235-201ENST00000364412 102 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.306-201ENST00000365015 102 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.312-201ENST00000365089 102 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.322-201ENST00000365151 102 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Z98949.2-201ENST00000440996 144 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.650-201ENST00000459002 102 ntBASIC1.64□□□□□ -2.15
MMP2P08253 OR9P1P-201ENST00000496431 281 ntBASIC1.64□□□□□ -2.15
MMP2P08253 RNA5SP458-201ENST00000516188 119 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.777-201ENST00000516982 102 ntBASIC1.64□□□□□ -2.15
MMP2P08253 RNU6-111P-201ENST00000517179 105 ntBASIC1.64□□□□□ -2.15
MMP2P08253 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.64□□□□□ -2.15
MMP2P08253 MIR5692C2-201ENST00000577959 77 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.771-201ENST00000598668 102 ntBASIC1.64□□□□□ -2.15
MMP2P08253 MIR502-201ENST00000606349 86 ntBASIC1.64□□□□□ -2.15
MMP2P08253 AL591926.4-201ENST00000616895 298 ntBASIC1.64□□□□□ -2.15
MMP2P08253 Y_RNA.789-201ENST00000622480 102 ntBASIC1.64□□□□□ -2.15
MMP2P08253 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MMP2P08253 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
MMP2P08253 SNORD68-201ENST00000363214 84 ntBASIC1.63□□□□□ -2.15
MMP2P08253 RNU6-379P-201ENST00000363813 104 ntBASIC1.63□□□□□ -2.15
MMP2P08253 RNU6-211P-201ENST00000384047 107 ntBASIC1.63□□□□□ -2.15
MMP2P08253 Y_RNA.478-201ENST00000384358 107 ntBASIC1.63□□□□□ -2.15
MMP2P08253 SNORD58.1-201ENST00000391313 66 ntBASIC1.63□□□□□ -2.15
MMP2P08253 Y_RNA.590-201ENST00000410140 107 ntBASIC1.63□□□□□ -2.15
MMP2P08253 RN7SKP101-201ENST00000411376 320 ntBASIC1.63□□□□□ -2.15
MMP2P08253 RNU6-437P-201ENST00000459408 95 ntBASIC1.63□□□□□ -2.15
MMP2P08253 SNORD116-28-201ENST00000516123 91 ntBASIC1.63□□□□□ -2.15
MMP2P08253 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.63□□□□□ -2.15
MMP2P08253 BX284668.6-201ENST00000606899 438 ntBASIC1.63□□□□□ -2.15
MMP2P08253 AC073349.3-201ENST00000617616 186 ntBASIC1.63□□□□□ -2.15
MMP2P08253 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.63□□□□□ -2.15
MMP2P08253 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
MMP2P08253 MIR126-201ENST00000362291 85 ntBASIC1.62□□□□□ -2.15
MMP2P08253 Y_RNA.122-201ENST00000363331 96 ntBASIC1.62□□□□□ -2.15
MMP2P08253 Y_RNA.203-201ENST00000364106 102 ntBASIC1.62□□□□□ -2.15
MMP2P08253 Y_RNA.253-201ENST00000364562 112 ntBASIC1.62□□□□□ -2.15
MMP2P08253 Y_RNA.269-201ENST00000364685 89 ntBASIC1.62□□□□□ -2.15
MMP2P08253 SNORA20.1-201ENST00000364790 130 ntBASIC1.62□□□□□ -2.15
MMP2P08253 Y_RNA.293-201ENST00000364908 93 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms