Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-1096P-201ENST00000517089 102 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 RNA5SP402-201ENST00000517148 110 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 CYCSP26-201ENST00000534107 320 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 AC112693.2-201ENST00000556538 232 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 U4atac.1-201ENST00000618345 95 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 U6.108-201ENST00000637764 58 ntBASIC2.36□□□□□ -2.03
HLA-DOAP06340 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DOAP06340 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
HLA-DOAP06340 RNU6-199P-201ENST00000362954 107 ntBASIC2.35□□□□□ -2.03
HLA-DOAP06340 RNU6-1209P-201ENST00000363655 107 ntBASIC2.35□□□□□ -2.03
HLA-DOAP06340 Y_RNA.203-201ENST00000364106 102 ntBASIC2.35□□□□□ -2.03
HLA-DOAP06340 Y_RNA.796-201ENST00000364268 102 ntBASIC2.35□□□□□ -2.03
HLA-DOAP06340 Y_RNA.799-201ENST00000364992 102 ntBASIC2.35□□□□□ -2.03
HLA-DOAP06340 Y_RNA.420-201ENST00000384043 110 ntBASIC2.35□□□□□ -2.03
HLA-DOAP06340 RNU6-22P-201ENST00000384355 107 ntBASIC2.35□□□□□ -2.03
HLA-DOAP06340 Y_RNA.521-201ENST00000384560 114 ntBASIC2.35□□□□□ -2.03
HLA-DOAP06340 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DOAP06340 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DOAP06340 RNA5SP182-201ENST00000516064 82 ntBASIC2.35□□□□□ -2.03
HLA-DOAP06340 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DOAP06340 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
HLA-DOAP06340 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DOAP06340 snoU2-30.2-201ENST00000362805 70 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 Y_RNA.91-201ENST00000363042 107 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 RNU1-96P-201ENST00000364163 162 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 Y_RNA.261-201ENST00000364631 102 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 RNU6-484P-201ENST00000384016 107 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 RNU1-148P-201ENST00000384472 162 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 RNU6-1117P-201ENST00000384525 104 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 SNORA22C-201ENST00000384614 134 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 SNORA26.9-201ENST00000391322 122 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 AL117342.1-201ENST00000404861 406 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 RNU6-1234P-201ENST00000516877 103 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DOAP06340 AC120024.3-201ENST00000603167 156 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 MIR338-201ENST00000636369 67 ntBASIC2.34□□□□□ -2.03
HLA-DOAP06340 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DOAP06340 ZNF271P-202ENST00000465539 1970 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 VTRNA1-1-201ENST00000363120 99 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 Y_RNA.99-201ENST00000363138 105 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 Y_RNA.218-201ENST00000364218 104 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 RNU6-1164P-201ENST00000364428 107 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 RNU6-482P-201ENST00000391068 107 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 MIR513C-201ENST00000401352 84 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 RNU4-43P-201ENST00000410628 137 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 Y_RNA.621-201ENST00000411065 96 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 EDDM3CP-201ENST00000415977 425 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 RPL30P13-201ENST00000418873 348 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 AL445685.2-201ENST00000422551 342 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DOAP06340 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DOAP06340 AC233266.1-201ENST00000454518 96 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 SNORD11-201ENST00000459124 84 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 AC242852.1-201ENST00000612151 96 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 MIR6845-201ENST00000613182 61 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 AL449363.1-201ENST00000617815 186 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 AC244015.1-201ENST00000622301 99 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 MIR6844-201ENST00000637122 62 ntBASIC2.33□□□□□ -2.04
HLA-DOAP06340 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HLA-DOAP06340 RNA5SP493-201ENST00000364115 91 ntBASIC2.32□□□□□ -2.04
HLA-DOAP06340 RNA5SP496-201ENST00000391240 109 ntBASIC2.32□□□□□ -2.04
HLA-DOAP06340 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.32□□□□□ -2.04
HLA-DOAP06340 SNORA31.15-201ENST00000516771 132 ntBASIC2.32□□□□□ -2.04
HLA-DOAP06340 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DOAP06340 MIR5089-201ENST00000580047 84 ntBASIC2.32□□□□□ -2.04
HLA-DOAP06340 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DOAP06340 RNU6-1290P-201ENST00000362957 109 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 SNORA38-201ENST00000363946 132 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 Y_RNA.393-201ENST00000383936 102 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 RNY3P5-201ENST00000384127 102 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 RNU6-160P-201ENST00000384591 107 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 SNORA40-201ENST00000388090 126 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 RNU2-51P-201ENST00000410708 197 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 RPS27P1-201ENST00000450552 247 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 HMGN2P23-201ENST00000456759 269 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 RNU6-1211P-201ENST00000459179 105 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 NDUFA4P2-201ENST00000489989 244 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DOAP06340 RPPH1-2P-201ENST00000516688 293 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 MIR3126-201ENST00000577443 74 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 MIR548AI-201ENST00000579940 88 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 AC091178.2-201ENST00000584401 117 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 uc_338.4-201ENST00000616635 176 ntBASIC2.31□□□□□ -2.04
HLA-DOAP06340 RNU6-862P-201ENST00000362804 105 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 Y_RNA.251-201ENST00000364551 99 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 Y_RNA.267-201ENST00000364679 109 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 Y_RNA.525-201ENST00000384570 113 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 SNORA12.1-201ENST00000390873 148 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 RNU6-1154P-201ENST00000391001 104 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 BX510359.4-201ENST00000423750 193 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 AC025033.1-201ENST00000463883 194 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 RNU7-99P-201ENST00000516271 62 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DOAP06340 MIR378D2-201ENST00000580636 98 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
HLA-DOAP06340 AL353997.5-201ENST00000618886 171 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DOAP06340 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 AC005336.3-201ENST00000623833 2679 ntBASIC2.3□□□□□ -2.04
HLA-DOAP06340 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms