Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 Y_RNA.23-201ENST00000362496 106 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 RNU6-199P-201ENST00000362954 107 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 RNU6-407P-201ENST00000365280 104 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 SNORA72.4-201ENST00000384174 132 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 SNORA67.2-201ENST00000384300 149 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 SNORA8.3-201ENST00000384679 139 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 SNORA40.19-201ENST00000390846 128 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 RNU6-1248P-201ENST00000391096 64 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.75□□□□□ -2.13
COL2A1P02458 AC114982.1-201ENST00000469402 321 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 AC010409.1-201ENST00000487382 476 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 RNU6-1333P-201ENST00000516162 93 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 Y_RNA.686-201ENST00000516548 134 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 RNU2-56P-201ENST00000516826 190 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 AC109810.1-201ENST00000534066 224 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.75□□□□□ -2.13
COL2A1P02458 AC005520.5-201ENST00000613926 164 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 AL157834.3-201ENST00000615543 103 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 MIR6076-201ENST00000617521 113 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 AC008873.1-201ENST00000625051 138 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.75□□□□□ -2.13
COL2A1P02458 RNU6-1205P-201ENST00000363625 106 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 Y_RNA.243-201ENST00000364481 109 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 SNORD50B-201ENST00000364995 70 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 Y_RNA.310-201ENST00000365063 113 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 RNU6-1264P-201ENST00000383891 107 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 SNORA40-201ENST00000388090 126 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 RNU6-1228P-201ENST00000391014 107 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 MIR513C-201ENST00000401352 84 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 AL606845.1-201ENST00000404881 255 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 MIR4431-201ENST00000579990 94 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.75□□□□□ -2.13
COL2A1P02458 AL359881.1-201ENST00000602916 267 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 Y_RNA.802-201ENST00000614892 130 ntBASIC1.75□□□□□ -2.13
COL2A1P02458 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.75□□□□□ -2.13
COL2A1P02458 AC245060.5-201ENST00000610778 3293 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
COL2A1P02458 ZNF209P-201ENST00000593450 2304 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL2A1P02458 RNU6-655P-201ENST00000362858 107 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 RNU5F-3P-201ENST00000363767 117 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 Y_RNA.420-201ENST00000384043 110 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 SNORD116-13-201ENST00000384408 92 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 MIR627-201ENST00000384979 97 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 AL355796.1-201ENST00000406706 323 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.74□□□□□ -2.13
COL2A1P02458 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.74□□□□□ -2.13
COL2A1P02458 AL441985.1-201ENST00000457727 251 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 RNU7-14P-201ENST00000459331 62 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.74□□□□□ -2.13
COL2A1P02458 RNU6-479P-201ENST00000516348 105 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 RNU5F-4P-201ENST00000516581 114 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 RNU6-965P-201ENST00000516721 96 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
COL2A1P02458 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.74□□□□□ -2.13
COL2A1P02458 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL2A1P02458 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
COL2A1P02458 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL2A1P02458 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL2A1P02458 Y_RNA.121-201ENST00000363309 113 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 RNU6-899P-201ENST00000363947 107 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 Y_RNA.229-201ENST00000364347 113 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 RNU6-487P-201ENST00000365430 104 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 RNU6-748P-201ENST00000384648 107 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 SNORA1.3-201ENST00000384676 136 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 RNU6-768P-201ENST00000384683 107 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 MIR598-201ENST00000384868 97 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 RNU6-750P-201ENST00000390946 107 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
COL2A1P02458 RPL30P13-201ENST00000418873 348 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 EBAG9P1-201ENST00000418955 543 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 AL354695.1-201ENST00000427935 228 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.73□□□□□ -2.13
COL2A1P02458 RNU7-107P-201ENST00000459121 61 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 MRPS36P2-201ENST00000512569 299 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 RNU7-121P-201ENST00000516604 62 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 RNU6-1223P-201ENST00000517124 104 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 AC112693.2-201ENST00000556538 232 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 MIR5694-201ENST00000581190 76 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 DNAJC19P2-201ENST00000593340 302 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 RPL30P11-203ENST00000598995 310 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 AC011603.4-201ENST00000611325 277 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 AL353770.2-201ENST00000620024 78 ntBASIC1.73□□□□□ -2.13
COL2A1P02458 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
COL2A1P02458 RNU6-235P-201ENST00000362644 107 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 U8.1-201ENST00000362843 134 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 RNU6-1210P-201ENST00000363775 107 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 RNU6-743P-201ENST00000364151 106 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 RNA5SP139-201ENST00000364340 117 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 RNU6-1325P-201ENST00000364905 105 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 RNU6-418P-201ENST00000384035 107 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 Y_RNA.521-201ENST00000384560 114 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 MIR15B-201ENST00000385045 98 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 Y_RNA.587-201ENST00000391210 103 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 RNU7-57P-201ENST00000459540 60 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.72□□□□□ -2.13
COL2A1P02458 RNU6-344P-201ENST00000516635 111 ntBASIC1.72□□□□□ -2.13
COL2A1P02458 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.72□□□□□ -2.13
COL2A1P02458 MIR6844-201ENST00000637122 62 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms