| RECQL4 | O94761 | RNU6-548P-201 | ENST00000517083 | 115 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | NDUFA5P6-201 | ENST00000542110 | 379 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | AP001363.1-201 | ENST00000544108 | 264 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | AC011604.1-201 | ENST00000545978 | 196 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | Y_RNA.91-201 | ENST00000363042 | 107 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | RNU6-1209P-201 | ENST00000363655 | 107 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | Y_RNA.294-201 | ENST00000364916 | 102 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | RNY3P5-201 | ENST00000384127 | 102 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | SRIP3-201 | ENST00000413200 | 219 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | AC009238.1-201 | ENST00000442165 | 424 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | AC009237.6-201 | ENST00000446969 | 424 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | RPS27P1-201 | ENST00000450552 | 247 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | SNORD11-201 | ENST00000459124 | 84 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | AC011406.1-201 | ENST00000512440 | 370 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | SNORA4.4-201 | ENST00000515921 | 135 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | AC073413.2-201 | ENST00000604332 | 360 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | FGF7-206 | ENST00000614567 | 3936 nt | APPRIS P1 TSL 1 (best) BASIC | 2.41 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | UHMK1-204 | ENST00000545294 | 8117 nt | TSL 2 BASIC | 2.4 | □□□□□ -2.02 | | |
| RECQL4 | O94761 | MIR6073-201 | ENST00000352083 | 89 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6-1080P-201 | ENST00000383982 | 107 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNA5SP496-201 | ENST00000391240 | 109 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | MIR1253-201 | ENST00000408273 | 105 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | MIR1262-201 | ENST00000408276 | 93 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC008852.1-201 | ENST00000510198 | 451 nt | TSL 2 BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6-1333P-201 | ENST00000516162 | 93 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6ATAC9P-201 | ENST00000516210 | 116 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6-1096P-201 | ENST00000517089 | 102 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | MIR378D2-201 | ENST00000580636 | 98 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | U6.108-201 | ENST00000637764 | 58 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | KTN1-203 | ENST00000395309 | 4021 nt | APPRIS ALT2 TSL 5 BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | ANKRD36-208 | ENST00000639751 | 3090 nt | TSL 5 BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | DDIAS-201 | ENST00000329143 | 3367 nt | APPRIS P2 TSL 1 (best) BASIC | 2.4 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | CENPQ-201 | ENST00000335783 | 1733 nt | APPRIS P1 TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SMARCAD1-201 | ENST00000354268 | 4912 nt | APPRIS P3 TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | Z82195.2-201 | ENST00000612348 | 18351 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC130466.1-201 | ENST00000636354 | 4683 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU1-96P-201 | ENST00000364163 | 162 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6-978P-201 | ENST00000364371 | 103 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AL035415.1-201 | ENST00000447150 | 289 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU2-56P-201 | ENST00000516826 | 190 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC004148.1-201 | ENST00000571506 | 398 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC034238.1-213 | ENST00000611148 | 150 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC009831.4-201 | ENST00000620744 | 325 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | snoU2-30.2-201 | ENST00000362805 | 70 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | Y_RNA.99-201 | ENST00000363138 | 105 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | Y_RNA.432-201 | ENST00000384087 | 111 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SNORA64-201 | ENST00000384674 | 134 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6-1291P-201 | ENST00000516591 | 104 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6-197P-201 | ENST00000516680 | 100 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC009930.1-201 | ENST00000522330 | 191 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | MIR3646-201 | ENST00000578301 | 84 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | uc_338.4-201 | ENST00000616635 | 176 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | MIR338-201 | ENST00000636369 | 67 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | KNL1-204 | ENST00000527044 | 5404 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6-508P-201 | ENST00000363231 | 103 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | Y_RNA.127-201 | ENST00000363386 | 109 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNA5SP205-201 | ENST00000364653 | 136 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | MIR764-201 | ENST00000390811 | 85 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AL117342.1-201 | ENST00000404861 | 406 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | MIR1289-2-201 | ENST00000408360 | 111 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | EDDM3CP-201 | ENST00000415977 | 425 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC008267.6-201 | ENST00000441664 | 139 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | NDUFA4P2-201 | ENST00000489989 | 244 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SNORD77.4-201 | ENST00000516158 | 81 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNA5SP200-201 | ENST00000516360 | 103 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | Y_RNA.686-201 | ENST00000516548 | 134 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SCARNA16.3-201 | ENST00000516595 | 184 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC091178.2-201 | ENST00000584401 | 117 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC011603.4-201 | ENST00000611325 | 277 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC022202.1-201 | ENST00000613515 | 211 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | LINC01068-202 | ENST00000620874 | 626 nt | TSL 3 BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | NEB-203 | ENST00000397345 | 26202 nt | APPRIS ALT2 TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | NEB-209 | ENST00000427231 | 26202 nt | APPRIS ALT2 TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | CALCRL-201 | ENST00000392370 | 5155 nt | APPRIS P1 TSL 1 (best) BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6-915P-201 | ENST00000364943 | 103 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6-597P-201 | ENST00000365620 | 102 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SNORD116-14-201 | ENST00000383894 | 92 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SNORD116-17-201 | ENST00000383929 | 92 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SNORA6-201 | ENST00000384033 | 151 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | Y_RNA.486-201 | ENST00000384398 | 107 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SNORD116-15-201 | ENST00000384445 | 92 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SNORD20-201 | ENST00000384550 | 80 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SNORD116-19-201 | ENST00000384729 | 92 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | MIR562-201 | ENST00000384894 | 95 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SNORA75.5-201 | ENST00000391291 | 81 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AL023284.1-201 | ENST00000403956 | 276 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | SNORA11.4-201 | ENST00000408823 | 129 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | Y_RNA.621-201 | ENST00000411065 | 96 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | HMGN2P3-201 | ENST00000433603 | 273 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | HMGN2P5-201 | ENST00000436882 | 273 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC233266.1-201 | ENST00000454518 | 96 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU7-107P-201 | ENST00000459121 | 61 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNA5SP458-201 | ENST00000516188 | 119 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | RNU6-1299P-201 | ENST00000516316 | 100 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC007598.1-202 | ENST00000561528 | 435 nt | TSL 3 BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC242852.1-201 | ENST00000612151 | 96 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | DSCR8-208 | ENST00000614538 | 403 nt | APPRIS P5 TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | MIR6132-201 | ENST00000622083 | 109 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| RECQL4 | O94761 | AC244015.1-201 | ENST00000622301 | 99 nt | BASIC | 2.36 | □□□□□ -2.03 | | |