Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.72□□□□□ -2.52
USH2AO75445 AC073648.5-201ENST00000603502 305 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 DISC2.1-201ENST00000612827 205 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 RNU6-873P-201ENST00000363833 107 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 SNORD45.3-201ENST00000363836 72 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 MIR186-201ENST00000384988 86 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 SNORD2-201ENST00000459163 69 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 RNU6-319P-201ENST00000516025 108 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 MIR4782-201ENST00000577987 79 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.72□□□□□ -2.53
USH2AO75445 AC008608.1-201ENST00000603910 127 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 RPS29P13-201ENST00000402041 169 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 TIMM9P3-201ENST00000428659 274 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 RNU7-74P-201ENST00000459104 62 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 RNU7-188P-201ENST00000517063 64 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 AC103591.3-201ENST00000608684 209 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 AC068880.4-201ENST00000623082 495 ntBASIC-0.72□□□□□ -2.53
USH2AO75445 SNORA12.2-201ENST00000391040 156 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.73□□□□□ -2.53
USH2AO75445 RNU6-765P-201ENST00000516916 99 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 MIR544B-201ENST00000582372 78 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 SNORA28-201ENST00000606769 126 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 MTND4P8-201ENST00000514997 1362 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 RNU6-949P-201ENST00000384040 107 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 SNORD51-201ENST00000384320 80 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 RNU6-800P-201ENST00000384473 103 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 ZNF114P1-201ENST00000453500 292 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 MTATP6P14-201ENST00000455189 673 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 MTCO3P38-201ENST00000468910 766 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 MTND3P5-201ENST00000512798 333 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.73□□□□□ -2.53
USH2AO75445 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.73□□□□□ -2.53
USH2AO75445 AL117336.2-201ENST00000602435 335 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.73□□□□□ -2.53
USH2AO75445 U6.48-201ENST00000618523 106 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 U6.114-201ENST00000636407 96 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 AL603914.1-201ENST00000401964 204 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 AC016632.1-201ENST00000503994 196 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.73□□□□□ -2.53
USH2AO75445 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.73□□□□□ -2.53
USH2AO75445 Y_RNA.15-201ENST00000362420 102 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 SNORD115-37-201ENST00000363768 82 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 RNU6-563P-201ENST00000364872 108 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 RNU6-622P-201ENST00000384272 103 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 MIR548H3-201ENST00000408771 118 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 AL512637.2-201ENST00000431287 1256 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 MTND2P22-201ENST00000444325 1033 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.73□□□□□ -2.53
USH2AO75445 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 AC103996.1-201ENST00000555468 102 ntBASIC-0.73□□□□□ -2.53
USH2AO75445 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.73□□□□□ -2.53
USH2AO75445 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.73□□□□□ -2.53
USH2AO75445 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.74□□□□□ -2.53
USH2AO75445 FGF7P4-201ENST00000509595 295 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 RNU7-128P-201ENST00000517247 62 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 AL391834.2-201ENST00000609982 546 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.74□□□□□ -2.53
USH2AO75445 RNU6-512P-201ENST00000364438 103 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 RNU6-843P-201ENST00000384454 104 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 RNU6-440P-201ENST00000390882 105 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 RNU6-817P-201ENST00000391083 104 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 RNA5SP237-201ENST00000410414 113 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 AC084290.1-201ENST00000434995 374 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.74□□□□□ -2.53
USH2AO75445 MIR4264-201ENST00000583520 66 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 AC104073.3-201ENST00000610942 955 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 AC117470.1-201ENST00000381974 330 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 MIR136-201ENST00000385207 82 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 USP9YP28-201ENST00000435142 589 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 AC139453.2-201ENST00000487255 133 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 MIR562-201ENST00000384894 95 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 SNORA49-201ENST00000386157 136 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 SNORD93-201ENST00000408813 74 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 RBMX2P4-201ENST00000441256 376 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.74□□□□□ -2.53
USH2AO75445 RNU1-142P-201ENST00000516682 145 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.74□□□□□ -2.53
USH2AO75445 AL355375.2-201ENST00000574825 175 ntBASIC-0.74□□□□□ -2.53
USH2AO75445 Z99497.2-201ENST00000603634 310 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms