Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR3202-2-201ENST00000635980 79 ntBASIC2.67□□□□□ -1.98
TRIM13O60858 AL162726.3-218ENST00000636401 95 ntBASIC2.67□□□□□ -1.98
TRIM13O60858 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
TRIM13O60858 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
TRIM13O60858 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM13O60858 MIR422A-201ENST00000362286 90 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 Y_RNA.17-201ENST00000362433 111 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 SNORA63D-201ENST00000364359 132 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 Y_RNA.265-201ENST00000364677 108 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 Y_RNA.621-201ENST00000411065 96 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 AL161788.1-201ENST00000441805 169 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM13O60858 RNU6-65P-201ENST00000516332 98 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 RN7SKP57-201ENST00000517248 293 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 AC004486.1-201ENST00000546846 233 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
TRIM13O60858 AC074050.1-201ENST00000563247 211 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 MIR4444-1-201ENST00000581696 74 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 MIR3670-2-201ENST00000582974 65 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 MIR3670-1-201ENST00000584160 65 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 MIR4444-2-201ENST00000584390 74 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 MIR3670-3-201ENST00000584855 65 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 AC021443.1-201ENST00000604478 211 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
TRIM13O60858 MIR3670-4-201ENST00000612260 65 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 AC012314.7-201ENST00000619693 93 ntBASIC2.66□□□□□ -1.98
TRIM13O60858 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM13O60858 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
TRIM13O60858 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.65□□□□□ -1.98
TRIM13O60858 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
TRIM13O60858 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
TRIM13O60858 RNA5SP374-201ENST00000362939 125 ntBASIC2.65□□□□□ -1.99
TRIM13O60858 RNU2-63P-201ENST00000410792 194 ntBASIC2.65□□□□□ -1.99
TRIM13O60858 AC025750.2-201ENST00000442609 450 ntBASIC2.65□□□□□ -1.99
TRIM13O60858 SUMO2P16-201ENST00000519475 264 ntBASIC2.65□□□□□ -1.99
TRIM13O60858 AC087685.1-201ENST00000587507 141 ntBASIC2.65□□□□□ -1.99
TRIM13O60858 FAM71BP1-201ENST00000604431 523 ntBASIC2.65□□□□□ -1.99
TRIM13O60858 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.65□□□□□ -1.99
TRIM13O60858 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM13O60858 Y_RNA.242-201ENST00000364473 110 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 Y_RNA.290-201ENST00000364879 114 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 RNU6-438P-201ENST00000365561 103 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 Y_RNA.410-201ENST00000383992 113 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 RNU6-1104P-201ENST00000384723 104 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 MIR95-201ENST00000385072 81 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 RNU6-972P-201ENST00000391208 107 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.64□□□□□ -1.99
TRIM13O60858 AP001486.1-201ENST00000463339 476 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM13O60858 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.64□□□□□ -1.99
TRIM13O60858 SCARNA23-201ENST00000516060 130 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 DEFB131E-201ENST00000532329 154 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 MIR3163-201ENST00000581592 73 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 AC073413.2-201ENST00000604332 360 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM13O60858 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.64□□□□□ -1.99
TRIM13O60858 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
TRIM13O60858 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM13O60858 ZNF720P1-201ENST00000562403 1939 ntBASIC2.64□□□□□ -1.99
TRIM13O60858 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
TRIM13O60858 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM13O60858 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM13O60858 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM13O60858 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM13O60858 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM13O60858 RNY3P2-201ENST00000362918 102 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 RNU1-96P-201ENST00000364163 162 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 RNU4-36P-201ENST00000364294 144 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 SNORA2.2-201ENST00000365473 135 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 RNU6-546P-201ENST00000383991 107 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 MIR1255A-201ENST00000408338 113 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 RPL39P25-201ENST00000449384 154 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 RNA5SP57-201ENST00000459463 123 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 AC022137.1-201ENST00000483735 151 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM13O60858 RNU7-123P-201ENST00000515911 60 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 SNORA48.11-201ENST00000517015 89 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 AC022523.2-201ENST00000561045 150 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 AL356280.1-201ENST00000603614 379 ntBASIC2.63□□□□□ -1.99
TRIM13O60858 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM13O60858 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM13O60858 SNORA71.3-201ENST00000362582 128 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 RNU6-461P-201ENST00000364195 107 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 RNY1P6-201ENST00000384193 109 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TRIM13O60858 RNA5SP210-201ENST00000391034 120 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 U8.17-201ENST00000391292 132 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 MIR1912-201ENST00000410389 80 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 EEF1A1P41-201ENST00000414667 207 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 RNU7-164P-201ENST00000459221 62 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 MIR4429-201ENST00000580105 73 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 MIR4635-201ENST00000583759 79 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 U2.20-201ENST00000613956 192 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 MIR6075-201ENST00000620782 95 ntBASIC2.62□□□□□ -1.99
TRIM13O60858 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
TRIM13O60858 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
TRIM13O60858 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
TRIM13O60858 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM13O60858 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 276 ms