Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 RNU6-440P-201ENST00000390882 105 ntBASIC2.01□□□□□ -2.09
SNX2O60749 RNU6-493P-201ENST00000391321 108 ntBASIC2.01□□□□□ -2.09
SNX2O60749 MIR1289-2-201ENST00000408360 111 ntBASIC2.01□□□□□ -2.09
SNX2O60749 RNU2-7P-201ENST00000410794 178 ntBASIC2.01□□□□□ -2.09
SNX2O60749 RNU7-94P-201ENST00000459576 63 ntBASIC2.01□□□□□ -2.09
SNX2O60749 COX6CP14-201ENST00000469580 174 ntBASIC2.01□□□□□ -2.09
SNX2O60749 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.01□□□□□ -2.09
SNX2O60749 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.01□□□□□ -2.09
SNX2O60749 MIR8054-201ENST00000620877 86 ntBASIC2.01□□□□□ -2.09
SNX2O60749 MIR411-201ENST00000362239 96 ntBASIC2□□□□□ -2.09
SNX2O60749 RNU6-414P-201ENST00000363705 104 ntBASIC2□□□□□ -2.09
SNX2O60749 RNU6-674P-201ENST00000363831 107 ntBASIC2□□□□□ -2.09
SNX2O60749 Y_RNA.203-201ENST00000364106 102 ntBASIC2□□□□□ -2.09
SNX2O60749 Y_RNA.297-201ENST00000364950 91 ntBASIC2□□□□□ -2.09
SNX2O60749 RNU6-47P-201ENST00000383866 107 ntBASIC2□□□□□ -2.09
SNX2O60749 RNU6-144P-201ENST00000383951 107 ntBASIC2□□□□□ -2.09
SNX2O60749 MIR626-201ENST00000385032 94 ntBASIC2□□□□□ -2.09
SNX2O60749 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
SNX2O60749 SNORA12.1-201ENST00000390873 148 ntBASIC2□□□□□ -2.09
SNX2O60749 RNU6-907P-201ENST00000390924 102 ntBASIC2□□□□□ -2.09
SNX2O60749 RNU6-360P-201ENST00000390944 104 ntBASIC2□□□□□ -2.09
SNX2O60749 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2□□□□□ -2.09
SNX2O60749 RPL31P63-201ENST00000422565 375 ntBASIC2□□□□□ -2.09
SNX2O60749 AL445646.1-201ENST00000431784 216 ntBASIC2□□□□□ -2.09
SNX2O60749 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2□□□□□ -2.09
SNX2O60749 MIR4308-201ENST00000580634 81 ntBASIC2□□□□□ -2.09
SNX2O60749 Y_RNA.802-201ENST00000614892 130 ntBASIC2□□□□□ -2.09
SNX2O60749 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2□□□□□ -2.09
SNX2O60749 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2□□□□□ -2.09
SNX2O60749 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SNX2O60749 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SNX2O60749 snoU2_19.4-201ENST00000364329 80 ntBASIC1.99□□□□□ -2.09
SNX2O60749 RNU6-969P-201ENST00000383900 105 ntBASIC1.99□□□□□ -2.09
SNX2O60749 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SNX2O60749 RNU11-5P-201ENST00000391216 129 ntBASIC1.99□□□□□ -2.09
SNX2O60749 HMGN2P23-201ENST00000456759 269 ntBASIC1.99□□□□□ -2.09
SNX2O60749 AL049830.1-201ENST00000468034 425 ntBASIC1.99□□□□□ -2.09
SNX2O60749 UBL5P3-201ENST00000475112 231 ntBASIC1.99□□□□□ -2.09
SNX2O60749 AP002004.2-201ENST00000531656 154 ntBASIC1.99□□□□□ -2.09
SNX2O60749 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.99□□□□□ -2.09
SNX2O60749 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SNX2O60749 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNX2O60749 RNU4-41P-201ENST00000364426 143 ntBASIC1.98□□□□□ -2.09
SNX2O60749 SNORA8.3-201ENST00000384679 139 ntBASIC1.98□□□□□ -2.09
SNX2O60749 MIR526A2-201ENST00000390198 65 ntBASIC1.98□□□□□ -2.09
SNX2O60749 Z98949.2-201ENST00000440996 144 ntBASIC1.98□□□□□ -2.09
SNX2O60749 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.98□□□□□ -2.09
SNX2O60749 SCARNA8-201ENST00000515924 131 ntBASIC1.98□□□□□ -2.09
SNX2O60749 RNU2-56P-201ENST00000516826 190 ntBASIC1.98□□□□□ -2.09
SNX2O60749 MIR4724-201ENST00000579485 89 ntBASIC1.98□□□□□ -2.09
SNX2O60749 MIR3124-201ENST00000582636 67 ntBASIC1.98□□□□□ -2.09
SNX2O60749 MIR7843-201ENST00000622274 79 ntBASIC1.98□□□□□ -2.09
SNX2O60749 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
SNX2O60749 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SNX2O60749 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNX2O60749 MIR367-201ENST00000362299 68 ntBASIC1.97□□□□□ -2.09
SNX2O60749 RNU6-1209P-201ENST00000363655 107 ntBASIC1.97□□□□□ -2.09
SNX2O60749 Y_RNA.796-201ENST00000364268 102 ntBASIC1.97□□□□□ -2.09
SNX2O60749 Y_RNA.253-201ENST00000364562 112 ntBASIC1.97□□□□□ -2.09
SNX2O60749 Y_RNA.799-201ENST00000364992 102 ntBASIC1.97□□□□□ -2.09
SNX2O60749 RNU2-2P-201ENST00000410396 191 ntBASIC1.97□□□□□ -2.09
SNX2O60749 COX6CP10-201ENST00000416832 224 ntBASIC1.97□□□□□ -2.09
SNX2O60749 MTND5P15-201ENST00000434246 349 ntBASIC1.97□□□□□ -2.09
SNX2O60749 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.97□□□□□ -2.09
SNX2O60749 STAG3L5P-204ENST00000443759 179 ntBASIC1.97□□□□□ -2.09
SNX2O60749 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.97□□□□□ -2.09
SNX2O60749 RNU6-453P-201ENST00000516819 85 ntBASIC1.97□□□□□ -2.09
SNX2O60749 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.97□□□□□ -2.09
SNX2O60749 AL358944.1-201ENST00000528537 144 ntBASIC1.97□□□□□ -2.09
SNX2O60749 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SNX2O60749 SNRPGP19-201ENST00000603826 189 ntBASIC1.97□□□□□ -2.09
SNX2O60749 AL591926.4-201ENST00000616895 298 ntBASIC1.97□□□□□ -2.09
SNX2O60749 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SNX2O60749 WWP1P1-201ENST00000466609 2769 ntBASIC1.97□□□□□ -2.09
SNX2O60749 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNX2O60749 Y_RNA.229-201ENST00000364347 113 ntBASIC1.96□□□□□ -2.1
SNX2O60749 MIR562-201ENST00000384894 95 ntBASIC1.96□□□□□ -2.1
SNX2O60749 MIR504-201ENST00000385065 83 ntBASIC1.96□□□□□ -2.1
SNX2O60749 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SNX2O60749 RNU6-918P-201ENST00000391219 106 ntBASIC1.96□□□□□ -2.1
SNX2O60749 RNU6-381P-201ENST00000391259 108 ntBASIC1.96□□□□□ -2.1
SNX2O60749 Y_RNA.644-201ENST00000459006 113 ntBASIC1.96□□□□□ -2.1
SNX2O60749 Y_RNA.674-201ENST00000516362 113 ntBASIC1.96□□□□□ -2.1
SNX2O60749 AC022559.1-201ENST00000520905 205 ntBASIC1.96□□□□□ -2.1
SNX2O60749 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNX2O60749 CBX3P4-201ENST00000538909 354 ntBASIC1.96□□□□□ -2.1
SNX2O60749 RPL23AP91-201ENST00000569211 455 ntBASIC1.96□□□□□ -2.1
SNX2O60749 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
SNX2O60749 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
SNX2O60749 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.96□□□□□ -2.1
SNX2O60749 Y_RNA.265-201ENST00000364677 108 ntBASIC1.95□□□□□ -2.1
SNX2O60749 MT-TT-201ENST00000387460 66 ntBASIC1.95□□□□□ -2.1
SNX2O60749 AC019129.1-201ENST00000403786 261 ntBASIC1.95□□□□□ -2.1
SNX2O60749 MIR1267-201ENST00000408723 78 ntBASIC1.95□□□□□ -2.1
SNX2O60749 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
SNX2O60749 snoU13.9-201ENST00000458927 103 ntBASIC1.95□□□□□ -2.1
SNX2O60749 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
SNX2O60749 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNX2O60749 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNX2O60749 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms