Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MTND5P15-201ENST00000434246 349 ntBASIC1.83□□□□□ -2.12
LDB2O43679 RNA5SP182-201ENST00000516064 82 ntBASIC1.83□□□□□ -2.12
LDB2O43679 RNY3P16-201ENST00000516338 101 ntBASIC1.83□□□□□ -2.12
LDB2O43679 RNA5SP364-201ENST00000516938 78 ntBASIC1.83□□□□□ -2.12
LDB2O43679 AL358944.1-201ENST00000528537 144 ntBASIC1.83□□□□□ -2.12
LDB2O43679 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LDB2O43679 MIR4724-201ENST00000579485 89 ntBASIC1.83□□□□□ -2.12
LDB2O43679 AL627230.6-201ENST00000611129 280 ntBASIC1.83□□□□□ -2.12
LDB2O43679 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.83□□□□□ -2.12
LDB2O43679 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
LDB2O43679 RNU6-923P-201ENST00000364753 107 ntBASIC1.82□□□□□ -2.12
LDB2O43679 MIR9-3-201ENST00000385084 90 ntBASIC1.82□□□□□ -2.12
LDB2O43679 RNU6-493P-201ENST00000391321 108 ntBASIC1.82□□□□□ -2.12
LDB2O43679 HMGN2P19-201ENST00000425149 265 ntBASIC1.82□□□□□ -2.12
LDB2O43679 Z98949.2-201ENST00000440996 144 ntBASIC1.82□□□□□ -2.12
LDB2O43679 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.82□□□□□ -2.12
LDB2O43679 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.82□□□□□ -2.12
LDB2O43679 RNU6-1291P-201ENST00000516591 104 ntBASIC1.82□□□□□ -2.12
LDB2O43679 RNU6-182P-201ENST00000516970 105 ntBASIC1.82□□□□□ -2.12
LDB2O43679 AL929325.1-201ENST00000603096 117 ntBASIC1.82□□□□□ -2.12
LDB2O43679 AC022217.4-201ENST00000604389 163 ntBASIC1.82□□□□□ -2.12
LDB2O43679 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LDB2O43679 RNU4-10P-201ENST00000364383 140 ntBASIC1.81□□□□□ -2.12
LDB2O43679 Y_RNA.267-201ENST00000364679 109 ntBASIC1.81□□□□□ -2.12
LDB2O43679 RPS27P1-201ENST00000450552 247 ntBASIC1.81□□□□□ -2.12
LDB2O43679 AC233266.1-201ENST00000454518 96 ntBASIC1.81□□□□□ -2.12
LDB2O43679 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.81□□□□□ -2.12
LDB2O43679 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
LDB2O43679 AP002004.2-201ENST00000531656 154 ntBASIC1.81□□□□□ -2.12
LDB2O43679 SUB1P4-201ENST00000566062 339 ntBASIC1.81□□□□□ -2.12
LDB2O43679 AC242852.1-201ENST00000612151 96 ntBASIC1.81□□□□□ -2.12
LDB2O43679 AC244015.1-201ENST00000622301 99 ntBASIC1.81□□□□□ -2.12
LDB2O43679 ZNF702P-202ENST00000434269 1966 ntBASIC1.81□□□□□ -2.12
LDB2O43679 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
LDB2O43679 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LDB2O43679 Y_RNA.24-201ENST00000362508 103 ntBASIC1.8□□□□□ -2.12
LDB2O43679 Y_RNA.203-201ENST00000364106 102 ntBASIC1.8□□□□□ -2.12
LDB2O43679 SNORA63D-201ENST00000364359 132 ntBASIC1.8□□□□□ -2.12
LDB2O43679 RNU6-47P-201ENST00000383866 107 ntBASIC1.8□□□□□ -2.12
LDB2O43679 RNU6-969P-201ENST00000383900 105 ntBASIC1.8□□□□□ -2.12
LDB2O43679 Y_RNA.435-201ENST00000384095 112 ntBASIC1.8□□□□□ -2.12
LDB2O43679 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LDB2O43679 RNU6-918P-201ENST00000391219 106 ntBASIC1.8□□□□□ -2.12
LDB2O43679 COX6CP10-201ENST00000416832 224 ntBASIC1.8□□□□□ -2.12
LDB2O43679 CYCSP49-201ENST00000420810 319 ntBASIC1.8□□□□□ -2.12
LDB2O43679 AC245047.3-201ENST00000429428 127 ntBASIC1.8□□□□□ -2.12
LDB2O43679 AL606517.2-201ENST00000442855 241 ntBASIC1.8□□□□□ -2.12
LDB2O43679 MRPS17P9-201ENST00000511924 393 ntBASIC1.8□□□□□ -2.12
LDB2O43679 RN7SKP164-201ENST00000516138 266 ntBASIC1.8□□□□□ -2.12
LDB2O43679 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.8□□□□□ -2.12
LDB2O43679 AP002392.1-201ENST00000537692 208 ntBASIC1.8□□□□□ -2.12
LDB2O43679 MIR4419B-201ENST00000577260 68 ntBASIC1.8□□□□□ -2.12
LDB2O43679 MIR4308-201ENST00000580634 81 ntBASIC1.8□□□□□ -2.12
LDB2O43679 AL096840.1-201ENST00000603287 93 ntBASIC1.8□□□□□ -2.12
LDB2O43679 AC004792.1-201ENST00000614523 137 ntBASIC1.8□□□□□ -2.12
LDB2O43679 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.8□□□□□ -2.12
LDB2O43679 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.8□□□□□ -2.12
LDB2O43679 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
LDB2O43679 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LDB2O43679 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
LDB2O43679 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LDB2O43679 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LDB2O43679 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
LDB2O43679 MIR520A-201ENST00000384862 85 ntBASIC1.79□□□□□ -2.12
LDB2O43679 RNA5SP109-201ENST00000391010 116 ntBASIC1.79□□□□□ -2.12
LDB2O43679 RNU6-381P-201ENST00000391259 108 ntBASIC1.79□□□□□ -2.12
LDB2O43679 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.79□□□□□ -2.12
LDB2O43679 RNU6-383P-201ENST00000410864 94 ntBASIC1.79□□□□□ -2.12
LDB2O43679 Y_RNA.621-201ENST00000411065 96 ntBASIC1.79□□□□□ -2.12
LDB2O43679 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.79□□□□□ -2.12
LDB2O43679 RNU7-120P-201ENST00000459334 63 ntBASIC1.79□□□□□ -2.12
LDB2O43679 RNU2-56P-201ENST00000516826 190 ntBASIC1.79□□□□□ -2.12
LDB2O43679 MIR2681-201ENST00000581814 105 ntBASIC1.79□□□□□ -2.12
LDB2O43679 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.79□□□□□ -2.12
LDB2O43679 AC098479.1-201ENST00000609225 154 ntBASIC1.79□□□□□ -2.12
LDB2O43679 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
LDB2O43679 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
LDB2O43679 Y_RNA.7-201ENST00000362352 102 ntBASIC1.78□□□□□ -2.12
LDB2O43679 SNORA1B-201ENST00000362535 133 ntBASIC1.78□□□□□ -2.12
LDB2O43679 Y_RNA.140-201ENST00000363474 103 ntBASIC1.78□□□□□ -2.12
LDB2O43679 RNU4-41P-201ENST00000364426 143 ntBASIC1.78□□□□□ -2.12
LDB2O43679 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
LDB2O43679 RNU6-1080P-201ENST00000383982 107 ntBASIC1.78□□□□□ -2.12
LDB2O43679 Y_RNA.572-201ENST00000384757 98 ntBASIC1.78□□□□□ -2.12
LDB2O43679 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
LDB2O43679 PIGPP3-201ENST00000425307 415 ntBASIC1.78□□□□□ -2.12
LDB2O43679 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.78□□□□□ -2.12
LDB2O43679 AC072026.1-201ENST00000605023 201 ntBASIC1.78□□□□□ -2.12
LDB2O43679 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
LDB2O43679 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
LDB2O43679 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LDB2O43679 RNA5SP276-201ENST00000362580 94 ntBASIC1.77□□□□□ -2.13
LDB2O43679 RNU1-17P-201ENST00000363022 152 ntBASIC1.77□□□□□ -2.13
LDB2O43679 Y_RNA.121-201ENST00000363309 113 ntBASIC1.77□□□□□ -2.13
LDB2O43679 RNU6-112P-201ENST00000363599 104 ntBASIC1.77□□□□□ -2.13
LDB2O43679 snoU2_19.4-201ENST00000364329 80 ntBASIC1.77□□□□□ -2.13
LDB2O43679 Y_RNA.229-201ENST00000364347 113 ntBASIC1.77□□□□□ -2.13
LDB2O43679 Y_RNA.238-201ENST00000364441 102 ntBASIC1.77□□□□□ -2.13
LDB2O43679 RNU6-296P-201ENST00000384608 107 ntBASIC1.77□□□□□ -2.13
LDB2O43679 RNU6-950P-201ENST00000384651 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms