Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MSH5O43196 MIR372-201ENST00000362225 67 ntBASIC5.88□□□□□ -1.47
MSH5O43196 RNU1-91P-201ENST00000364746 163 ntBASIC5.88□□□□□ -1.47
MSH5O43196 RNA5SP366-201ENST00000365454 123 ntBASIC5.88□□□□□ -1.47
MSH5O43196 MIR607-201ENST00000385241 96 ntBASIC5.88□□□□□ -1.47
MSH5O43196 RNU6ATAC37P-201ENST00000408328 131 ntBASIC5.88□□□□□ -1.47
MSH5O43196 RN7SL98P-201ENST00000462271 300 ntBASIC5.88□□□□□ -1.47
MSH5O43196 AC105129.1-201ENST00000560250 297 ntBASIC5.88□□□□□ -1.47
MSH5O43196 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.88□□□□□ -1.47
MSH5O43196 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MSH5O43196 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.88□□□□□ -1.47
MSH5O43196 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
MSH5O43196 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
MSH5O43196 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MSH5O43196 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.87□□□□□ -1.47
MSH5O43196 RNU6-838P-201ENST00000363399 108 ntBASIC5.87□□□□□ -1.47
MSH5O43196 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC5.87□□□□□ -1.47
MSH5O43196 MIR4444-1-201ENST00000581696 74 ntBASIC5.87□□□□□ -1.47
MSH5O43196 MIR4444-2-201ENST00000584390 74 ntBASIC5.87□□□□□ -1.47
MSH5O43196 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
MSH5O43196 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.87□□□□□ -1.47
MSH5O43196 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.86□□□□□ -1.47
MSH5O43196 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
MSH5O43196 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.86□□□□□ -1.47
MSH5O43196 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
MSH5O43196 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
MSH5O43196 MIR383-201ENST00000362257 73 ntBASIC5.86□□□□□ -1.47
MSH5O43196 MIR208A-201ENST00000362287 71 ntBASIC5.86□□□□□ -1.47
MSH5O43196 RNU1-23P-201ENST00000363361 144 ntBASIC5.86□□□□□ -1.47
MSH5O43196 RNA5SP97-201ENST00000365006 84 ntBASIC5.86□□□□□ -1.47
MSH5O43196 RNU6-1054P-201ENST00000411293 104 ntBASIC5.86□□□□□ -1.47
MSH5O43196 RNU6-894P-201ENST00000517094 105 ntBASIC5.86□□□□□ -1.47
MSH5O43196 MIR4491-201ENST00000581087 68 ntBASIC5.86□□□□□ -1.47
MSH5O43196 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC5.86□□□□□ -1.47
MSH5O43196 MIR492-201ENST00000638676 116 ntBASIC5.86□□□□□ -1.47
MSH5O43196 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.86□□□□□ -1.47
MSH5O43196 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MSH5O43196 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
MSH5O43196 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MSH5O43196 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
MSH5O43196 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MSH5O43196 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MSH5O43196 MIR708-201ENST00000390708 88 ntBASIC5.85□□□□□ -1.47
MSH5O43196 RNU7-195P-201ENST00000458793 62 ntBASIC5.85□□□□□ -1.47
MSH5O43196 RPS26P15-201ENST00000488067 348 ntBASIC5.85□□□□□ -1.47
MSH5O43196 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.85□□□□□ -1.47
MSH5O43196 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.84□□□□□ -1.47
MSH5O43196 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MSH5O43196 RNU6-525P-201ENST00000363685 104 ntBASIC5.84□□□□□ -1.47
MSH5O43196 RNU6-935P-201ENST00000410371 100 ntBASIC5.84□□□□□ -1.47
MSH5O43196 CRYBB2P1-203ENST00000415709 538 ntBASIC5.84□□□□□ -1.47
MSH5O43196 RNU6-531P-201ENST00000516694 104 ntBASIC5.84□□□□□ -1.47
MSH5O43196 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
MSH5O43196 AP001005.3-201ENST00000622049 129 ntBASIC5.84□□□□□ -1.47
MSH5O43196 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.84□□□□□ -1.48
MSH5O43196 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MSH5O43196 AL022322.2-201ENST00000624072 20397 ntBASIC5.83□□□□□ -1.48
MSH5O43196 RNU1-132P-201ENST00000364300 164 ntBASIC5.83□□□□□ -1.48
MSH5O43196 MIR6075-201ENST00000620782 95 ntBASIC5.83□□□□□ -1.48
MSH5O43196 AC006111.3-201ENST00000622137 383 ntBASIC5.83□□□□□ -1.48
MSH5O43196 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
MSH5O43196 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
MSH5O43196 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
MSH5O43196 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
MSH5O43196 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
MSH5O43196 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MSH5O43196 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
MSH5O43196 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
MSH5O43196 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
MSH5O43196 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.82□□□□□ -1.48
MSH5O43196 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MSH5O43196 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.82□□□□□ -1.48
MSH5O43196 AL117339.2-201ENST00000430475 180 ntBASIC5.82□□□□□ -1.48
MSH5O43196 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.82□□□□□ -1.48
MSH5O43196 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.82□□□□□ -1.48
MSH5O43196 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
MSH5O43196 RNU2-48P-201ENST00000410694 191 ntBASIC5.81□□□□□ -1.48
MSH5O43196 HMGN2P35-201ENST00000412164 270 ntBASIC5.81□□□□□ -1.48
MSH5O43196 SCARNA14-201ENST00000516903 136 ntBASIC5.81□□□□□ -1.48
MSH5O43196 IFITM8P-201ENST00000522529 394 ntBASIC5.81□□□□□ -1.48
MSH5O43196 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
MSH5O43196 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MSH5O43196 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
MSH5O43196 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MSH5O43196 SNORD46.1-201ENST00000364139 104 ntBASIC5.8□□□□□ -1.48
MSH5O43196 MIR548AO-201ENST00000579992 96 ntBASIC5.8□□□□□ -1.48
MSH5O43196 MIR4286-201ENST00000580651 93 ntBASIC5.8□□□□□ -1.48
MSH5O43196 MIR3944-201ENST00000581277 108 ntBASIC5.8□□□□□ -1.48
MSH5O43196 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MSH5O43196 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MSH5O43196 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
MSH5O43196 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MSH5O43196 MIR526A1-201ENST00000384897 85 ntBASIC5.79□□□□□ -1.48
MSH5O43196 AL034345.1-201ENST00000407768 123 ntBASIC5.79□□□□□ -1.48
MSH5O43196 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC5.79□□□□□ -1.48
MSH5O43196 HSPE1P9-201ENST00000440046 311 ntBASIC5.79□□□□□ -1.48
MSH5O43196 RPS29P12-201ENST00000460178 152 ntBASIC5.79□□□□□ -1.48
MSH5O43196 AC025445.1-201ENST00000502728 300 ntBASIC5.79□□□□□ -1.48
MSH5O43196 MIR6875-201ENST00000617506 72 ntBASIC5.79□□□□□ -1.48
MSH5O43196 MIR6076-201ENST00000617521 113 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms