Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU6-63P-201ENST00000516690 95 ntBASIC2.55□□□□□ -2
FOXN1O15353 AC079598.5-201ENST00000547460 117 ntBASIC2.55□□□□□ -2
FOXN1O15353 Y_RNA.757-201ENST00000578934 114 ntBASIC2.55□□□□□ -2
FOXN1O15353 AC005972.2-201ENST00000604690 348 ntBASIC2.55□□□□□ -2
FOXN1O15353 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.55□□□□□ -2
FOXN1O15353 Z82209.1-201ENST00000422141 2135 ntBASIC2.54□□□□□ -2
FOXN1O15353 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
FOXN1O15353 U8.1-201ENST00000362843 134 ntBASIC2.54□□□□□ -2
FOXN1O15353 SNORA79-201ENST00000408376 140 ntBASIC2.54□□□□□ -2
FOXN1O15353 Y_RNA.630-201ENST00000411370 108 ntBASIC2.54□□□□□ -2
FOXN1O15353 AC092427.1-202ENST00000430569 476 ntBASIC2.54□□□□□ -2
FOXN1O15353 MICF-203ENST00000432679 129 ntBASIC2.54□□□□□ -2
FOXN1O15353 AC245047.4-201ENST00000433189 144 ntBASIC2.54□□□□□ -2
FOXN1O15353 SNORD65B-201ENST00000459126 73 ntBASIC2.54□□□□□ -2
FOXN1O15353 RPS26P55-201ENST00000471178 356 ntBASIC2.54□□□□□ -2
FOXN1O15353 RPL23AP63-201ENST00000498752 471 ntBASIC2.54□□□□□ -2
FOXN1O15353 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.54□□□□□ -2
FOXN1O15353 AC027419.1-201ENST00000522976 328 ntBASIC2.54□□□□□ -2
FOXN1O15353 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.54□□□□□ -2
FOXN1O15353 MIR3121-201ENST00000579680 77 ntBASIC2.54□□□□□ -2
FOXN1O15353 RPL17P51-201ENST00000605218 238 ntBASIC2.54□□□□□ -2
FOXN1O15353 MIR4679-1-201ENST00000637619 75 ntBASIC2.54□□□□□ -2
FOXN1O15353 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.54□□□□□ -2
FOXN1O15353 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
FOXN1O15353 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
FOXN1O15353 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
FOXN1O15353 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.53□□□□□ -2
FOXN1O15353 RNU6-978P-201ENST00000364371 103 ntBASIC2.53□□□□□ -2
FOXN1O15353 RNU4-41P-201ENST00000364426 143 ntBASIC2.53□□□□□ -2
FOXN1O15353 RNA5SP190-201ENST00000365222 118 ntBASIC2.53□□□□□ -2
FOXN1O15353 RNU6-147P-201ENST00000383983 107 ntBASIC2.53□□□□□ -2
FOXN1O15353 RNA5SP496-201ENST00000391240 109 ntBASIC2.53□□□□□ -2
FOXN1O15353 MIR1283-1-201ENST00000408494 87 ntBASIC2.53□□□□□ -2
FOXN1O15353 RN7SKP101-201ENST00000411376 320 ntBASIC2.53□□□□□ -2
FOXN1O15353 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.53□□□□□ -2
FOXN1O15353 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.53□□□□□ -2
FOXN1O15353 AL158147.1-201ENST00000443970 75 ntBASIC2.53□□□□□ -2
FOXN1O15353 Y_RNA.692-201ENST00000516627 105 ntBASIC2.53□□□□□ -2
FOXN1O15353 RNU6-197P-201ENST00000516680 100 ntBASIC2.53□□□□□ -2
FOXN1O15353 AL356280.1-201ENST00000603614 379 ntBASIC2.53□□□□□ -2
FOXN1O15353 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
FOXN1O15353 AL159152.1-201ENST00000635019 2587 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 RNU6-674P-201ENST00000363831 107 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 Y_RNA.280-201ENST00000364765 112 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 RNU6-484P-201ENST00000384016 107 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 RNU6-1083P-201ENST00000384022 107 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 MLLT10P1-201ENST00000418346 262 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 EIF4EP4-201ENST00000424916 578 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 RNU7-14P-201ENST00000459331 62 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 AC080013.2-201ENST00000460866 323 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 AC104435.1-201ENST00000483483 166 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 AC010598.1-201ENST00000510378 103 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXN1O15353 SNORD33.1-201ENST00000516213 88 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 SNORA31.15-201ENST00000516771 132 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 RNU7-116P-201ENST00000516940 62 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 RNU6-56P-201ENST00000516986 93 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.52□□□□□ -2.01
FOXN1O15353 AL049861.1-201ENST00000603130 150 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 AL021707.8-201ENST00000609428 183 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
FOXN1O15353 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.52□□□□□ -2.01
FOXN1O15353 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.52□□□□□ -2.01
FOXN1O15353 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXN1O15353 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.52□□□□□ -2.01
FOXN1O15353 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
FOXN1O15353 RNU6-508P-201ENST00000363231 103 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 Y_RNA.114-201ENST00000363265 113 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 RNU6-271P-201ENST00000363858 105 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 Y_RNA.432-201ENST00000384087 111 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 AC019129.1-201ENST00000403786 261 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 RNA5SP511-201ENST00000410487 115 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 AC097463.2-201ENST00000421074 142 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 AC063976.4-201ENST00000421971 163 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXN1O15353 AC016717.1-201ENST00000448918 286 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 AC090515.1-201ENST00000465295 476 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 RNA5SP20-201ENST00000515976 84 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 AC133485.4-201ENST00000561835 220 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 AC138907.4-201ENST00000570107 226 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 RPL30P11-203ENST00000598995 310 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 MIR6734-201ENST00000621166 68 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 snoZ196.1-201ENST00000625269 89 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 U6.95-201ENST00000636931 70 ntBASIC2.51□□□□□ -2.01
FOXN1O15353 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
FOXN1O15353 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
FOXN1O15353 Y_RNA.120-201ENST00000363304 110 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 RNU6-1080P-201ENST00000383982 107 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 RNU6-136P-201ENST00000384663 107 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 MIR300-201ENST00000401138 83 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 RNU6-1328P-201ENST00000410938 106 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 RNU6-57P-201ENST00000411348 103 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 RNU6-221P-201ENST00000459541 99 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 RNU6-1299P-201ENST00000516316 100 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 RNU6-1061P-201ENST00000516530 99 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 PRELID2P1-201ENST00000552837 301 ntBASIC2.5□□□□□ -2.01
FOXN1O15353 MIR5002-201ENST00000584713 97 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms