Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL117187.1-201ENST00000555482 181 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 MIR3660-201ENST00000584845 100 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 AC136443.5-201ENST00000603741 370 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 AP003357.1-201ENST00000604497 148 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 AC037487.3-201ENST00000606668 112 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 AC073349.3-201ENST00000617616 186 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 AC068647.2-201ENST00000637380 353 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 PGBD4P5-201ENST00000445958 426 ntBASIC1.57□□□□□ -2.16
ATP2A1O14983 U8.19-201ENST00000459095 133 ntBASIC1.57□□□□□ -2.16
ATP2A1O14983 AC015688.6-201ENST00000577737 104 ntBASIC1.57□□□□□ -2.16
ATP2A1O14983 AL157834.3-201ENST00000615543 103 ntBASIC1.57□□□□□ -2.16
ATP2A1O14983 ICE2P2-201ENST00000483823 2787 ntBASIC1.57□□□□□ -2.16
ATP2A1O14983 SNORA25.1-201ENST00000362326 128 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 SNORA25.9-201ENST00000365087 128 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 SNORA72.4-201ENST00000384174 132 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 RNU6-514P-201ENST00000384208 107 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 Y_RNA.459-201ENST00000384251 102 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 Y_RNA.574-201ENST00000384766 95 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 MIR1276-201ENST00000408707 83 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 RNU6-1203P-201ENST00000410703 110 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 Y_RNA.621-201ENST00000411065 96 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.56□□□□□ -2.16
ATP2A1O14983 AC104332.1-201ENST00000440471 797 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 RNU6-327P-201ENST00000516270 127 ntBASIC1.56□□□□□ -2.16
ATP2A1O14983 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.56□□□□□ -2.16
ATP2A1O14983 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
ATP2A1O14983 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ATP2A1O14983 MIR302D-201ENST00000362275 68 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 Y_RNA.162-201ENST00000363683 102 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 RNU6-1080P-201ENST00000383982 107 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 RPL30P13-201ENST00000418873 348 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 RNU7-115P-201ENST00000516433 55 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.55□□□□□ -2.16
ATP2A1O14983 AC024405.2-202ENST00000532731 184 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 AC127455.1-201ENST00000565496 145 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 POLR3GP1-201ENST00000594073 261 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 AL078604.3-201ENST00000615580 211 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 MIR548AY-201ENST00000617669 107 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 AC099654.10-201ENST00000640395 161 ntBASIC1.55□□□□□ -2.16
ATP2A1O14983 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ATP2A1O14983 Y_RNA.16-201ENST00000362421 102 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 Y_RNA.176-201ENST00000363815 109 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 RNU6-801P-201ENST00000364087 105 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 RNU4-41P-201ENST00000364426 143 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 RNU6-424P-201ENST00000384367 105 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 MIR513A1-201ENST00000385138 129 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 MIR660-201ENST00000385235 97 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 MTND2P23-201ENST00000422990 651 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 AL358176.2-201ENST00000425769 204 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 TRBVB-201ENST00000477100 408 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 AC004223.1-201ENST00000479840 271 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 SERF1AP1-201ENST00000514575 187 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 RNU6-1338P-201ENST00000516328 91 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 RNU6-570P-201ENST00000517051 105 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 AL512605.2-201ENST00000592972 256 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 AL353621.2-201ENST00000605340 133 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 MIR8062-201ENST00000621515 85 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 MIR8063-201ENST00000621930 81 ntBASIC1.54□□□□□ -2.16
ATP2A1O14983 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
ATP2A1O14983 RNU6-238P-201ENST00000363313 106 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 U8.7-201ENST00000364940 136 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 RNU6-53P-201ENST00000365367 106 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 RNU6-1105P-201ENST00000384774 107 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 CALM2P4-201ENST00000430810 426 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 Z98949.2-201ENST00000440996 144 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 RNU7-141P-201ENST00000459304 62 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 AC117454.1-201ENST00000491120 168 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 AC091959.1-201ENST00000495857 238 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 RNU6-1045P-201ENST00000516321 107 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 RNA5SP168-201ENST00000516642 112 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 AC008269.2-201ENST00000561915 1105 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 MIR4422-201ENST00000581938 83 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 SNORD3E-202ENST00000627253 216 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 U6.104-201ENST00000637979 90 ntBASIC1.53□□□□□ -2.16
ATP2A1O14983 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
ATP2A1O14983 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ATP2A1O14983 SNORD33-201ENST00000362761 85 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 Y_RNA.149-201ENST00000363558 117 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 U8.5-201ENST00000364528 136 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 Y_RNA.253-201ENST00000364562 112 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 SNORD1A-201ENST00000364968 72 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 Y_RNA.376-201ENST00000365638 108 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 Y_RNA.512-201ENST00000384518 102 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 SNORA26.5-201ENST00000391215 123 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 U8.16-201ENST00000391279 133 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 RNU2-14P-201ENST00000411053 191 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 HMGN1P7-201ENST00000491722 313 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.52□□□□□ -2.17
ATP2A1O14983 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.52□□□□□ -2.17
ATP2A1O14983 MIR4762-201ENST00000585261 75 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 AL591926.4-201ENST00000616895 298 ntBASIC1.52□□□□□ -2.17
ATP2A1O14983 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ATP2A1O14983 MIRLET7C-201ENST00000362160 84 ntBASIC1.51□□□□□ -2.17
ATP2A1O14983 RNU6-1048P-201ENST00000364054 107 ntBASIC1.51□□□□□ -2.17
ATP2A1O14983 Y_RNA.461-201ENST00000384263 103 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms