Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 Y_RNA.418-201ENST00000384029 102 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.28□□□□□ -2.2
AP3D1O14617 HMGN2P32-201ENST00000444648 269 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 RNU6-496P-201ENST00000516145 99 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 RNU6-947P-201ENST00000516264 106 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 SNORD111.1-201ENST00000516421 86 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 BX284668.6-201ENST00000606899 438 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
AP3D1O14617 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
AP3D1O14617 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
AP3D1O14617 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.27□□□□□ -2.21
AP3D1O14617 Y_RNA.136-201ENST00000363444 102 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 RNU6-801P-201ENST00000364087 105 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 Y_RNA.276-201ENST00000364732 109 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 Y_RNA.380-201ENST00000365663 111 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 SNORA72.4-201ENST00000384174 132 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 RNU6-102P-201ENST00000384485 104 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 RPL23AP54-201ENST00000495129 419 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 SNORA70.22-201ENST00000517160 124 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 AL096861.1-201ENST00000610899 123 ntBASIC1.27□□□□□ -2.21
AP3D1O14617 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.27□□□□□ -2.21
AP3D1O14617 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.27□□□□□ -2.21
AP3D1O14617 Y_RNA.11-201ENST00000362375 109 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 Y_RNA.158-201ENST00000363651 101 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 RNU1-124P-201ENST00000363861 145 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 MIR136-201ENST00000385207 82 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 MTCO2P12-201ENST00000427426 682 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 RNU7-141P-201ENST00000459304 62 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 RPS23P4-201ENST00000487908 423 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 RNU6-191P-201ENST00000516295 94 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 AC090142.3-201ENST00000519012 385 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 DNAJC19P9-201ENST00000555084 351 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 AC087685.1-201ENST00000587507 141 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.26□□□□□ -2.21
AP3D1O14617 AL353997.5-201ENST00000618886 171 ntBASIC1.26□□□□□ -2.21
AP3D1O14617 RNU4-90P-201ENST00000362773 141 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 RNA5SP99-201ENST00000364020 114 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 SNORA70.7-201ENST00000384159 133 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 MIR516B2-201ENST00000385190 85 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 Y_RNA.581-201ENST00000391017 97 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 Y_RNA.602-201ENST00000410535 92 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 RNU2-14P-201ENST00000411053 191 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 RNU7-40P-201ENST00000516397 64 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 SNORA74.3-201ENST00000517108 154 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 MIR4524B-201ENST00000581569 115 ntBASIC1.25□□□□□ -2.21
AP3D1O14617 Y_RNA.105-201ENST00000363182 111 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 RNU6-674P-201ENST00000363831 107 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 Y_RNA.796-201ENST00000364268 102 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 Y_RNA.799-201ENST00000364992 102 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 Y_RNA.363-201ENST00000365529 113 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 MIR15B-201ENST00000385045 98 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 SNORD12-201ENST00000391002 90 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 SNORA36B-201ENST00000410438 131 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 RNU6-121P-201ENST00000410525 99 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 AC015922.2-201ENST00000435593 184 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.24□□□□□ -2.21
AP3D1O14617 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.24□□□□□ -2.21
AP3D1O14617 Y_RNA.701-201ENST00000516812 110 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 MIR3171-201ENST00000584270 74 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 JPX_2.1-201ENST00000614161 69 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 AC007742.2-201ENST00000618226 398 ntBASIC1.24□□□□□ -2.21
AP3D1O14617 ZNF209P-201ENST00000593450 2304 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
AP3D1O14617 RNU6-1209P-201ENST00000363655 107 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 RNU6-1048P-201ENST00000364054 107 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 RNU6-1227P-201ENST00000383981 107 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 MIR19B1-201ENST00000384829 87 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 MIR222-201ENST00000384992 110 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 SNORA26.5-201ENST00000391215 123 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 RNU4-62P-201ENST00000410125 130 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 snoU13.25-201ENST00000458945 104 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 RNU6-437P-201ENST00000459408 95 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 SNORD79.1-201ENST00000516069 84 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.23□□□□□ -2.21
AP3D1O14617 MIR2681-201ENST00000581814 105 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 AL355297.3-201ENST00000604082 446 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 AL391903.3-201ENST00000612158 163 ntBASIC1.23□□□□□ -2.21
AP3D1O14617 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
AP3D1O14617 Y_RNA.455-201ENST00000384230 98 ntBASIC1.22□□□□□ -2.21
AP3D1O14617 Y_RNA.569-201ENST00000384749 103 ntBASIC1.22□□□□□ -2.21
AP3D1O14617 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
AP3D1O14617 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.22□□□□□ -2.21
AP3D1O14617 RPS29P29-201ENST00000456396 171 ntBASIC1.22□□□□□ -2.21
AP3D1O14617 NDUFA4P2-201ENST00000489989 244 ntBASIC1.22□□□□□ -2.21
AP3D1O14617 RNU6-764P-201ENST00000516396 105 ntBASIC1.22□□□□□ -2.21
AP3D1O14617 MIR4680-201ENST00000580906 66 ntBASIC1.22□□□□□ -2.21
AP3D1O14617 MIR3192-201ENST00000584920 77 ntBASIC1.22□□□□□ -2.21
AP3D1O14617 AC005357.1-201ENST00000588399 301 ntBASIC1.22□□□□□ -2.21
AP3D1O14617 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
AP3D1O14617 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
AP3D1O14617 SNORD14E-201ENST00000364009 85 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms