Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC021506.2-201ENST00000612354 169 ntBASIC1.25□□□□□ -2.21
E2F3O00716 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
E2F3O00716 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
E2F3O00716 MIR96-201ENST00000362288 78 ntBASIC1.24□□□□□ -2.21
E2F3O00716 SNORA1B-201ENST00000362535 133 ntBASIC1.24□□□□□ -2.21
E2F3O00716 SNORA63-201ENST00000363450 132 ntBASIC1.24□□□□□ -2.21
E2F3O00716 RNU6-694P-201ENST00000364071 147 ntBASIC1.24□□□□□ -2.21
E2F3O00716 Y_RNA.286-201ENST00000364813 102 ntBASIC1.24□□□□□ -2.21
E2F3O00716 Y_RNA.422-201ENST00000384054 114 ntBASIC1.24□□□□□ -2.21
E2F3O00716 RNU6-1011P-201ENST00000384668 107 ntBASIC1.24□□□□□ -2.21
E2F3O00716 SNORD115-46-201ENST00000390982 71 ntBASIC1.24□□□□□ -2.21
E2F3O00716 RNU6-985P-201ENST00000410182 104 ntBASIC1.24□□□□□ -2.21
E2F3O00716 AC136443.5-201ENST00000603741 370 ntBASIC1.24□□□□□ -2.21
E2F3O00716 AC005972.2-201ENST00000604690 348 ntBASIC1.24□□□□□ -2.21
E2F3O00716 MIR8065-201ENST00000620577 100 ntBASIC1.24□□□□□ -2.21
E2F3O00716 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
E2F3O00716 RNU6-1123P-201ENST00000362347 106 ntBASIC1.23□□□□□ -2.21
E2F3O00716 Y_RNA.19-201ENST00000362462 99 ntBASIC1.23□□□□□ -2.21
E2F3O00716 Y_RNA.214-201ENST00000364201 112 ntBASIC1.23□□□□□ -2.21
E2F3O00716 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
E2F3O00716 ELOCP20-201ENST00000422460 345 ntBASIC1.23□□□□□ -2.21
E2F3O00716 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
E2F3O00716 RPS20P10-201ENST00000451209 253 ntBASIC1.23□□□□□ -2.21
E2F3O00716 AC010655.3-201ENST00000478818 450 ntBASIC1.23□□□□□ -2.21
E2F3O00716 RNU7-28P-201ENST00000516759 62 ntBASIC1.23□□□□□ -2.21
E2F3O00716 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.23□□□□□ -2.21
E2F3O00716 SUMO2P16-201ENST00000519475 264 ntBASIC1.23□□□□□ -2.21
E2F3O00716 AC011604.1-201ENST00000545978 196 ntBASIC1.23□□□□□ -2.21
E2F3O00716 AL442663.2-201ENST00000554385 511 ntBASIC1.23□□□□□ -2.21
E2F3O00716 AC073349.3-201ENST00000617616 186 ntBASIC1.23□□□□□ -2.21
E2F3O00716 SNORD3E-202ENST00000627253 216 ntBASIC1.23□□□□□ -2.21
E2F3O00716 AC068647.2-201ENST00000637380 353 ntBASIC1.23□□□□□ -2.21
E2F3O00716 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
E2F3O00716 RNU4-90P-201ENST00000362773 141 ntBASIC1.22□□□□□ -2.21
E2F3O00716 RNU6-1080P-201ENST00000383982 107 ntBASIC1.22□□□□□ -2.21
E2F3O00716 Y_RNA.569-201ENST00000384749 103 ntBASIC1.22□□□□□ -2.21
E2F3O00716 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
E2F3O00716 RNU6-1248P-201ENST00000391096 64 ntBASIC1.22□□□□□ -2.21
E2F3O00716 RNA5SP482-201ENST00000391269 118 ntBASIC1.22□□□□□ -2.21
E2F3O00716 AL590004.1-201ENST00000405321 300 ntBASIC1.22□□□□□ -2.21
E2F3O00716 PGBD4P5-201ENST00000445958 426 ntBASIC1.22□□□□□ -2.21
E2F3O00716 RPS4XP11-201ENST00000446897 772 ntBASIC1.22□□□□□ -2.21
E2F3O00716 HMGN1P10-201ENST00000474557 553 ntBASIC1.22□□□□□ -2.21
E2F3O00716 AC098869.1-201ENST00000481627 292 ntBASIC1.22□□□□□ -2.21
E2F3O00716 RNU6-1143P-201ENST00000516125 104 ntBASIC1.22□□□□□ -2.21
E2F3O00716 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
E2F3O00716 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.22□□□□□ -2.21
E2F3O00716 AC006504.6-201ENST00000590142 199 ntBASIC1.22□□□□□ -2.21
E2F3O00716 AC004832.4-201ENST00000608952 331 ntBASIC1.22□□□□□ -2.21
E2F3O00716 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.22□□□□□ -2.21
E2F3O00716 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
E2F3O00716 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
E2F3O00716 Y_RNA.105-201ENST00000363182 111 ntBASIC1.21□□□□□ -2.22
E2F3O00716 Y_RNA.456-201ENST00000384232 111 ntBASIC1.21□□□□□ -2.22
E2F3O00716 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.21□□□□□ -2.22
E2F3O00716 LINC01399-202ENST00000458450 244 ntBASIC1.21□□□□□ -2.22
E2F3O00716 AL133373.1-201ENST00000497098 94 ntBASIC1.21□□□□□ -2.22
E2F3O00716 MRPS35P2-201ENST00000508242 191 ntBASIC1.21□□□□□ -2.22
E2F3O00716 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.21□□□□□ -2.22
E2F3O00716 RNA5SP168-201ENST00000516642 112 ntBASIC1.21□□□□□ -2.22
E2F3O00716 RN7SKP88-201ENST00000516847 250 ntBASIC1.21□□□□□ -2.22
E2F3O00716 AL358944.1-201ENST00000528537 144 ntBASIC1.21□□□□□ -2.22
E2F3O00716 7SK.8-201ENST00000612110 250 ntBASIC1.21□□□□□ -2.22
E2F3O00716 7SK.11-201ENST00000615477 250 ntBASIC1.21□□□□□ -2.22
E2F3O00716 7SK.13-201ENST00000622040 250 ntBASIC1.21□□□□□ -2.22
E2F3O00716 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
E2F3O00716 Y_RNA.64-201ENST00000362845 102 ntBASIC1.2□□□□□ -2.22
E2F3O00716 RNU4-80P-201ENST00000363200 141 ntBASIC1.2□□□□□ -2.22
E2F3O00716 SNORD68-201ENST00000363214 84 ntBASIC1.2□□□□□ -2.22
E2F3O00716 Y_RNA.153-201ENST00000363615 91 ntBASIC1.2□□□□□ -2.22
E2F3O00716 Y_RNA.310-201ENST00000365063 113 ntBASIC1.2□□□□□ -2.22
E2F3O00716 RNU6-806P-201ENST00000365147 105 ntBASIC1.2□□□□□ -2.22
E2F3O00716 Y_RNA.368-201ENST00000365547 113 ntBASIC1.2□□□□□ -2.22
E2F3O00716 SNORA70.7-201ENST00000384159 133 ntBASIC1.2□□□□□ -2.22
E2F3O00716 RNU6-102P-201ENST00000384485 104 ntBASIC1.2□□□□□ -2.22
E2F3O00716 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
E2F3O00716 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.2□□□□□ -2.22
E2F3O00716 RNU6-121P-201ENST00000410525 99 ntBASIC1.2□□□□□ -2.22
E2F3O00716 AC113618.1-201ENST00000416747 285 ntBASIC1.2□□□□□ -2.22
E2F3O00716 HSPE1P25-201ENST00000455484 251 ntBASIC1.2□□□□□ -2.22
E2F3O00716 RNU6-496P-201ENST00000516145 99 ntBASIC1.2□□□□□ -2.22
E2F3O00716 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
E2F3O00716 POLR3GP1-201ENST00000594073 261 ntBASIC1.2□□□□□ -2.22
E2F3O00716 Y_RNA.812-201ENST00000610788 101 ntBASIC1.2□□□□□ -2.22
E2F3O00716 Y_RNA.784-201ENST00000613803 101 ntBASIC1.2□□□□□ -2.22
E2F3O00716 Y_RNA.787-201ENST00000616522 101 ntBASIC1.2□□□□□ -2.22
E2F3O00716 Y_RNA.780-201ENST00000617336 101 ntBASIC1.2□□□□□ -2.22
E2F3O00716 Y_RNA.801-201ENST00000619005 101 ntBASIC1.2□□□□□ -2.22
E2F3O00716 AL513423.1-201ENST00000621695 132 ntBASIC1.2□□□□□ -2.22
E2F3O00716 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
E2F3O00716 RNU4-41P-201ENST00000364426 143 ntBASIC1.19□□□□□ -2.22
E2F3O00716 RNU1-93P-201ENST00000364704 169 ntBASIC1.19□□□□□ -2.22
E2F3O00716 Y_RNA.276-201ENST00000364732 109 ntBASIC1.19□□□□□ -2.22
E2F3O00716 Y_RNA.326-201ENST00000365176 113 ntBASIC1.19□□□□□ -2.22
E2F3O00716 SNORA72-201ENST00000384339 132 ntBASIC1.19□□□□□ -2.22
E2F3O00716 RNU6-1105P-201ENST00000384774 107 ntBASIC1.19□□□□□ -2.22
E2F3O00716 MIR215-201ENST00000384858 110 ntBASIC1.19□□□□□ -2.22
E2F3O00716 U8.16-201ENST00000391279 133 ntBASIC1.19□□□□□ -2.22
E2F3O00716 MLLT10P1-201ENST00000418346 262 ntBASIC1.19□□□□□ -2.22
E2F3O00716 CALM2P4-201ENST00000430810 426 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms