Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM38O00635 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM38O00635 MIR3613-201ENST00000579844 87 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 AC007229.1-201ENST00000590455 412 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.32□□□□□ -2.04
TRIM38O00635 AL353149.1-201ENST00000610667 244 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 AL391903.3-201ENST00000612158 163 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 AP001340.1-201ENST00000624405 217 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM38O00635 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
TRIM38O00635 MTND5P32-201ENST00000560711 1802 ntBASIC2.31□□□□□ -2.04
TRIM38O00635 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM38O00635 Y_RNA.361-201ENST00000365515 120 ntBASIC2.31□□□□□ -2.04
TRIM38O00635 RNU6-1144P-201ENST00000384247 104 ntBASIC2.31□□□□□ -2.04
TRIM38O00635 AL606845.1-201ENST00000404881 255 ntBASIC2.31□□□□□ -2.04
TRIM38O00635 RNU6-855P-201ENST00000410395 104 ntBASIC2.31□□□□□ -2.04
TRIM38O00635 AL158823.1-201ENST00000418441 478 ntBASIC2.31□□□□□ -2.04
TRIM38O00635 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM38O00635 Y_RNA.709-201ENST00000516952 92 ntBASIC2.31□□□□□ -2.04
TRIM38O00635 AP001328.1-201ENST00000528550 176 ntBASIC2.31□□□□□ -2.04
TRIM38O00635 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM38O00635 AC008555.8-201ENST00000623602 2168 ntBASIC2.31□□□□□ -2.04
TRIM38O00635 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 RNU6-755P-201ENST00000364400 103 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 Y_RNA.341-201ENST00000365341 102 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM38O00635 AC016717.1-201ENST00000448918 286 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 RNU6-589P-201ENST00000516485 107 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 Y_RNA.712-201ENST00000517011 92 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 MIR3646-201ENST00000578301 84 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 U7.2-201ENST00000607576 63 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 MIR6844-201ENST00000637122 62 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 AL159152.1-201ENST00000635019 2587 ntBASIC2.3□□□□□ -2.04
TRIM38O00635 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
TRIM38O00635 RNU6-235P-201ENST00000362644 107 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 RNU6-1205P-201ENST00000363625 106 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 RNU6-1082P-201ENST00000364574 107 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 RNU6-915P-201ENST00000364943 103 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 Y_RNA.456-201ENST00000384232 111 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 SNORA40.5-201ENST00000391061 128 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 RNU11-3P-201ENST00000391111 133 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 RNU6-383P-201ENST00000410864 94 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 RNU6-57P-201ENST00000411348 103 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.29□□□□□ -2.04
TRIM38O00635 HMGN2P3-201ENST00000433603 273 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 HMGN2P5-201ENST00000436882 273 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 HSPE1P13-201ENST00000451143 297 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 ATP5J2P3-201ENST00000451550 258 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM38O00635 MIR5694-201ENST00000581190 76 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 U1.36-201ENST00000620684 176 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 U6.115-201ENST00000636045 103 ntBASIC2.29□□□□□ -2.04
TRIM38O00635 RNU6-1336P-201ENST00000383886 109 ntBASIC2.28□□□□□ -2.04
TRIM38O00635 Y_RNA.393-201ENST00000383936 102 ntBASIC2.28□□□□□ -2.04
TRIM38O00635 RNU6-147P-201ENST00000383983 107 ntBASIC2.28□□□□□ -2.04
TRIM38O00635 MIR764-201ENST00000390811 85 ntBASIC2.28□□□□□ -2.04
TRIM38O00635 RNU6-1228P-201ENST00000391014 107 ntBASIC2.28□□□□□ -2.04
TRIM38O00635 AL512604.1-201ENST00000404812 257 ntBASIC2.28□□□□□ -2.04
TRIM38O00635 RNU6-710P-201ENST00000410424 105 ntBASIC2.28□□□□□ -2.04
TRIM38O00635 RNU6-1146P-201ENST00000516282 102 ntBASIC2.28□□□□□ -2.04
TRIM38O00635 MIR4679-2-201ENST00000578358 77 ntBASIC2.28□□□□□ -2.04
TRIM38O00635 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM38O00635 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
TRIM38O00635 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
TRIM38O00635 CENPCP1-201ENST00000533085 2578 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.27□□□□□ -2.05
TRIM38O00635 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM38O00635 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.27□□□□□ -2.05
TRIM38O00635 SNORD114-1-201ENST00000362705 72 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 SNORA25.7-201ENST00000364375 127 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 SNORA22-201ENST00000383907 134 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 MIR597-201ENST00000384968 97 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TRIM38O00635 snoU13.23-201ENST00000458863 104 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 RN7SKP179-201ENST00000516126 217 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 AC025647.1-201ENST00000517879 253 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 AC090049.2-201ENST00000550377 109 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 MTND5P34-201ENST00000568888 325 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.27□□□□□ -2.05
TRIM38O00635 MIR3914-2-201ENST00000637339 95 ntBASIC2.27□□□□□ -2.05
TRIM38O00635 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM38O00635 U8.7-201ENST00000364940 136 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 RNU6-728P-201ENST00000365375 104 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 Y_RNA.521-201ENST00000384560 114 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 SNORA48.1-201ENST00000390879 135 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 SNORA75.5-201ENST00000391291 81 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 MIR1278-201ENST00000408753 81 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 RNU4-43P-201ENST00000410628 137 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 AC060773.1-201ENST00000421698 310 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 AL591806.2-201ENST00000433122 173 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 RPS27P1-201ENST00000450552 247 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 AC104435.1-201ENST00000483483 166 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM38O00635 AC011406.1-201ENST00000512440 370 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 RNU6-772P-201ENST00000516042 105 ntBASIC2.26□□□□□ -2.05
TRIM38O00635 MIR4724-201ENST00000579485 89 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms