Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.71□□□□□ -2.3
CLDN5O00501 Y_RNA.118-201ENST00000363300 101 ntBASIC0.7□□□□□ -2.3
CLDN5O00501 Y_RNA.474-201ENST00000384341 102 ntBASIC0.7□□□□□ -2.3
CLDN5O00501 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
CLDN5O00501 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
CLDN5O00501 AC099799.1-201ENST00000439809 192 ntBASIC0.7□□□□□ -2.3
CLDN5O00501 AC109810.1-201ENST00000534066 224 ntBASIC0.7□□□□□ -2.3
CLDN5O00501 AC022441.3-201ENST00000605737 136 ntBASIC0.7□□□□□ -2.3
CLDN5O00501 RNA5SP48-201ENST00000363969 126 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 Y_RNA.230-201ENST00000364348 109 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 Y_RNA.259-201ENST00000364619 101 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 SNORD50B-201ENST00000364995 70 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 RNU6-1175P-201ENST00000365200 107 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 RNU6-1335P-201ENST00000365426 107 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 MCFD2P1-201ENST00000417812 300 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 RPS26P5-201ENST00000418544 335 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 SNORD123-201ENST00000459473 70 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 RNU7-43P-201ENST00000516554 64 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 Y_RNA.714-201ENST00000517065 90 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 RN7SKP295-201ENST00000517264 153 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 AP003716.2-201ENST00000528260 108 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 MTND4LP32-201ENST00000636111 270 ntBASIC0.69□□□□□ -2.3
CLDN5O00501 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CLDN5O00501 Y_RNA.27-201ENST00000362540 103 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 RNU6-490P-201ENST00000362985 107 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 Y_RNA.796-201ENST00000364268 102 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 Y_RNA.799-201ENST00000364992 102 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 MIR559-201ENST00000385188 96 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 SNORD89-201ENST00000390981 114 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.68□□□□□ -2.3
CLDN5O00501 AL035398.1-201ENST00000430869 322 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 U8.19-201ENST00000459095 133 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 RN7SKP164-201ENST00000516138 266 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 RNU6-699P-201ENST00000517081 110 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 AC006600.1-201ENST00000572529 153 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 AL353765.1-201ENST00000605514 183 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 AC104465.1-201ENST00000611365 139 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 AC138305.3-201ENST00000624988 240 ntBASIC0.68□□□□□ -2.3
CLDN5O00501 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CLDN5O00501 SNORD14E-201ENST00000364009 85 ntBASIC0.67□□□□□ -2.3
CLDN5O00501 MIR489-201ENST00000384923 84 ntBASIC0.67□□□□□ -2.3
CLDN5O00501 RNU6-710P-201ENST00000410424 105 ntBASIC0.67□□□□□ -2.3
CLDN5O00501 RNU6-1132P-201ENST00000459214 107 ntBASIC0.67□□□□□ -2.3
CLDN5O00501 snoU13.18-201ENST00000459483 104 ntBASIC0.67□□□□□ -2.3
CLDN5O00501 RNU6-911P-201ENST00000516523 104 ntBASIC0.67□□□□□ -2.3
CLDN5O00501 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
CLDN5O00501 RNU6-94P-201ENST00000607728 107 ntBASIC0.67□□□□□ -2.3
CLDN5O00501 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.67□□□□□ -2.3
CLDN5O00501 7SK.10-201ENST00000621414 298 ntBASIC0.67□□□□□ -2.3
CLDN5O00501 Y_RNA.341-201ENST00000365341 102 ntBASIC0.66□□□□□ -2.3
CLDN5O00501 Y_RNA.368-201ENST00000365547 113 ntBASIC0.66□□□□□ -2.3
CLDN5O00501 Y_RNA.570-201ENST00000384750 101 ntBASIC0.66□□□□□ -2.3
CLDN5O00501 AC098614.3-201ENST00000438957 440 ntBASIC0.66□□□□□ -2.3
CLDN5O00501 AC005042.3-201ENST00000453230 174 ntBASIC0.66□□□□□ -2.3
CLDN5O00501 AC093027.1-201ENST00000546698 429 ntBASIC0.66□□□□□ -2.3
CLDN5O00501 POLR3GP1-201ENST00000594073 261 ntBASIC0.66□□□□□ -2.3
CLDN5O00501 MIR6515-201ENST00000619843 57 ntBASIC0.66□□□□□ -2.3
CLDN5O00501 Y_RNA.148-201ENST00000363557 117 ntBASIC0.65□□□□□ -2.31
CLDN5O00501 RNU1-133P-201ENST00000364867 167 ntBASIC0.65□□□□□ -2.31
CLDN5O00501 MIR802-201ENST00000390235 94 ntBASIC0.65□□□□□ -2.31
CLDN5O00501 AL590004.1-201ENST00000405321 300 ntBASIC0.65□□□□□ -2.31
CLDN5O00501 RNU6-994P-201ENST00000410507 111 ntBASIC0.65□□□□□ -2.31
CLDN5O00501 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.65□□□□□ -2.31
CLDN5O00501 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.65□□□□□ -2.31
CLDN5O00501 AC067940.1-201ENST00000458411 300 ntBASIC0.65□□□□□ -2.31
CLDN5O00501 VN1R91P-201ENST00000594377 169 ntBASIC0.65□□□□□ -2.31
CLDN5O00501 AC025253.1-201ENST00000613623 543 ntBASIC0.65□□□□□ -2.31
CLDN5O00501 JPX_2.1-201ENST00000614161 69 ntBASIC0.65□□□□□ -2.31
CLDN5O00501 MIR4251-201ENST00000635819 61 ntBASIC0.65□□□□□ -2.31
CLDN5O00501 AC134026.1-201ENST00000623249 2239 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 AC068700.1-201ENST00000565862 3754 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 Y_RNA.331-201ENST00000365267 102 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 RNU6-1040P-201ENST00000383974 107 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 RNY4P36-201ENST00000391116 96 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.64□□□□□ -2.31
CLDN5O00501 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.64□□□□□ -2.31
CLDN5O00501 AC005730.3-201ENST00000583067 366 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 DEFB117-201ENST00000602356 141 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 RBM11P1-201ENST00000604951 799 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 AL355073.2-201ENST00000612106 557 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 AC008133.2-201ENST00000624540 351 ntBASIC0.64□□□□□ -2.31
CLDN5O00501 Y_RNA.203-201ENST00000364106 102 ntBASIC0.63□□□□□ -2.31
CLDN5O00501 Y_RNA.387-201ENST00000383918 102 ntBASIC0.63□□□□□ -2.31
CLDN5O00501 RNU6-1323P-201ENST00000384025 107 ntBASIC0.63□□□□□ -2.31
CLDN5O00501 Y_RNA.428-201ENST00000384078 102 ntBASIC0.63□□□□□ -2.31
CLDN5O00501 SNORD38C-201ENST00000384381 69 ntBASIC0.63□□□□□ -2.31
CLDN5O00501 U7.7-201ENST00000459276 60 ntBASIC0.63□□□□□ -2.31
CLDN5O00501 RPL23AP54-201ENST00000495129 419 ntBASIC0.63□□□□□ -2.31
CLDN5O00501 AC113410.1-201ENST00000505029 247 ntBASIC0.63□□□□□ -2.31
CLDN5O00501 RNU7-116P-201ENST00000516940 62 ntBASIC0.63□□□□□ -2.31
CLDN5O00501 AC024405.2-202ENST00000532731 184 ntBASIC0.63□□□□□ -2.31
CLDN5O00501 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms