Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 MIR515-2-201ENST00000384883 83 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 MIR515-1-201ENST00000384884 83 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 MIR1263-201ENST00000408324 86 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 RN7SL636P-201ENST00000497504 294 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 RNU6-693P-201ENST00000516134 107 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 RNU6-168P-201ENST00000516189 101 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 RNU6-1041P-201ENST00000516254 102 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 RNU6-1270P-201ENST00000517128 108 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 RNU6-667P-201ENST00000517186 102 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.16□□□□□ -1.9
NFKBIEO00221 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.16□□□□□ -1.9
NFKBIEO00221 AC022217.4-201ENST00000604389 163 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 MIR338-201ENST00000636369 67 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 MIR7153-201ENST00000637758 57 ntBASIC3.16□□□□□ -1.9
NFKBIEO00221 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
NFKBIEO00221 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NFKBIEO00221 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NFKBIEO00221 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.9
NFKBIEO00221 ZNF271P-202ENST00000465539 1970 ntBASIC3.15□□□□□ -1.91
NFKBIEO00221 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.15□□□□□ -1.91
NFKBIEO00221 RNA5SP467-201ENST00000391274 118 ntBASIC3.15□□□□□ -1.91
NFKBIEO00221 RNA5SP136-201ENST00000410906 107 ntBASIC3.15□□□□□ -1.91
NFKBIEO00221 SRIP3-201ENST00000413200 219 ntBASIC3.15□□□□□ -1.91
NFKBIEO00221 SNRPGP13-201ENST00000442212 177 ntBASIC3.15□□□□□ -1.91
NFKBIEO00221 AL031737.1-201ENST00000450125 223 ntBASIC3.15□□□□□ -1.91
NFKBIEO00221 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
NFKBIEO00221 AL353149.1-201ENST00000610667 244 ntBASIC3.15□□□□□ -1.91
NFKBIEO00221 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.15□□□□□ -1.91
NFKBIEO00221 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NFKBIEO00221 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NFKBIEO00221 Y_RNA.528-201ENST00000384575 108 ntBASIC3.14□□□□□ -1.91
NFKBIEO00221 SNORD72-201ENST00000390994 80 ntBASIC3.14□□□□□ -1.91
NFKBIEO00221 RNA5SP89-201ENST00000410300 108 ntBASIC3.14□□□□□ -1.91
NFKBIEO00221 UQCRHP3-201ENST00000451503 251 ntBASIC3.14□□□□□ -1.91
NFKBIEO00221 AL049830.1-201ENST00000468034 425 ntBASIC3.14□□□□□ -1.91
NFKBIEO00221 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.14□□□□□ -1.91
NFKBIEO00221 RNA5SP236-201ENST00000516169 116 ntBASIC3.14□□□□□ -1.91
NFKBIEO00221 Y_RNA.666-201ENST00000516187 112 ntBASIC3.14□□□□□ -1.91
NFKBIEO00221 RNU7-128P-201ENST00000517247 62 ntBASIC3.14□□□□□ -1.91
NFKBIEO00221 MIR3616-201ENST00000584070 92 ntBASIC3.14□□□□□ -1.91
NFKBIEO00221 AC006254.2-201ENST00000603259 279 ntBASIC3.14□□□□□ -1.91
NFKBIEO00221 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
NFKBIEO00221 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
NFKBIEO00221 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NFKBIEO00221 Y_RNA.99-201ENST00000363138 105 ntBASIC3.13□□□□□ -1.91
NFKBIEO00221 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.13□□□□□ -1.91
NFKBIEO00221 AL356320.1-201ENST00000429616 163 ntBASIC3.13□□□□□ -1.91
NFKBIEO00221 Y_RNA.694-201ENST00000516677 117 ntBASIC3.13□□□□□ -1.91
NFKBIEO00221 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.13□□□□□ -1.91
NFKBIEO00221 AP002004.2-201ENST00000531656 154 ntBASIC3.13□□□□□ -1.91
NFKBIEO00221 MIR1273D-201ENST00000577266 86 ntBASIC3.13□□□□□ -1.91
NFKBIEO00221 MIR4635-201ENST00000583759 79 ntBASIC3.13□□□□□ -1.91
NFKBIEO00221 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.13□□□□□ -1.91
NFKBIEO00221 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NFKBIEO00221 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NFKBIEO00221 AC108206.1-201ENST00000570186 4159 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NFKBIEO00221 SNORD114-1-201ENST00000362705 72 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 RNU6-32P-201ENST00000383948 107 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 RNU6-13P-201ENST00000384248 107 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 RNU6-12P-201ENST00000384604 107 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 RNU6-41P-201ENST00000384741 107 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 FTH1P12-201ENST00000432137 551 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 ATP5J2P3-201ENST00000451550 258 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 RNU1-131P-201ENST00000458943 161 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 RN7SKP43-201ENST00000516173 320 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 RNU6-1149P-201ENST00000516810 97 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 AC024995.1-201ENST00000523014 93 ntBASIC3.12□□□□□ -1.91
NFKBIEO00221 RNA5SP383-201ENST00000362934 120 ntBASIC3.11□□□□□ -1.91
NFKBIEO00221 SNORA8-201ENST00000384574 139 ntBASIC3.11□□□□□ -1.91
NFKBIEO00221 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.11□□□□□ -1.91
NFKBIEO00221 AC234781.5-201ENST00000508429 271 ntBASIC3.11□□□□□ -1.91
NFKBIEO00221 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
NFKBIEO00221 AL137067.1-201ENST00000615933 120 ntBASIC3.11□□□□□ -1.91
NFKBIEO00221 AL591926.4-201ENST00000616895 298 ntBASIC3.11□□□□□ -1.91
NFKBIEO00221 RNA5SP125-201ENST00000364843 120 ntBASIC3.1□□□□□ -1.91
NFKBIEO00221 RNU6-160P-201ENST00000384591 107 ntBASIC3.1□□□□□ -1.91
NFKBIEO00221 SNORD77.3-201ENST00000391113 65 ntBASIC3.1□□□□□ -1.91
NFKBIEO00221 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.1□□□□□ -1.91
NFKBIEO00221 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.1□□□□□ -1.91
NFKBIEO00221 RPS29P24-201ENST00000486345 171 ntBASIC3.1□□□□□ -1.91
NFKBIEO00221 AP006437.1-201ENST00000641440 3685 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 Y_RNA.116-201ENST00000363292 103 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 SNORA25B-201ENST00000365507 128 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 Y_RNA.410-201ENST00000383992 113 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 Y_RNA.495-201ENST00000384435 112 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 MIR522-201ENST00000385071 87 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 RN7SL442P-201ENST00000473804 320 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 COX6CP6-201ENST00000490840 228 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 SNORA72.7-201ENST00000516349 94 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 IGKV1-22-201ENST00000524313 326 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 AC134878.1-201ENST00000619901 243 ntBASIC3.09□□□□□ -1.91
NFKBIEO00221 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
NFKBIEO00221 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
NFKBIEO00221 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NFKBIEO00221 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms