Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.75□□□□□ -2.29
DDX39AO00148 Y_RNA.172-201ENST00000363765 102 ntBASIC0.75□□□□□ -2.29
DDX39AO00148 SNORA72-201ENST00000384339 132 ntBASIC0.75□□□□□ -2.29
DDX39AO00148 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
DDX39AO00148 MIR628-201ENST00000385229 95 ntBASIC0.75□□□□□ -2.29
DDX39AO00148 Y_RNA.599-201ENST00000410489 109 ntBASIC0.75□□□□□ -2.29
DDX39AO00148 AL390729.2-201ENST00000416137 156 ntBASIC0.75□□□□□ -2.29
DDX39AO00148 MTCO3P10-201ENST00000455912 772 ntBASIC0.75□□□□□ -2.29
DDX39AO00148 AC067940.1-201ENST00000458411 300 ntBASIC0.75□□□□□ -2.29
DDX39AO00148 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.75□□□□□ -2.29
DDX39AO00148 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 RNU6-626P-201ENST00000363354 107 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 Y_RNA.505-201ENST00000384489 102 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 MIR613-201ENST00000385248 95 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 RNU6-1199P-201ENST00000411249 104 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.74□□□□□ -2.29
DDX39AO00148 SNRPGP10-201ENST00000432323 225 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 MTND5P15-201ENST00000434246 349 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 U7.7-201ENST00000459276 60 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 SNORD123-201ENST00000459473 70 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 RN7SKP164-201ENST00000516138 266 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 RNU6-1012P-201ENST00000516606 109 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 AC025627.3-201ENST00000582078 182 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 AC011476.5-201ENST00000615594 130 ntBASIC0.74□□□□□ -2.29
DDX39AO00148 AL442644.1-201ENST00000454390 3105 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
DDX39AO00148 AC023934.1-201ENST00000574529 2389 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 Y_RNA.230-201ENST00000364348 109 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 RNU1-133P-201ENST00000364867 167 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 Y_RNA.653-201ENST00000459091 95 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 AC113410.1-201ENST00000505029 247 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 RNU6-559P-201ENST00000516151 98 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 RNU6-436P-201ENST00000516171 114 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 RNU6-966P-201ENST00000516479 104 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 AC113139.1-201ENST00000605049 239 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.73□□□□□ -2.29
DDX39AO00148 U2.1-201ENST00000618978 145 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 AC138305.3-201ENST00000624988 240 ntBASIC0.73□□□□□ -2.29
DDX39AO00148 Y_RNA.314-201ENST00000365114 102 ntBASIC0.72□□□□□ -2.29
DDX39AO00148 RNU6-1335P-201ENST00000365426 107 ntBASIC0.72□□□□□ -2.29
DDX39AO00148 SNORD89-201ENST00000390981 114 ntBASIC0.72□□□□□ -2.29
DDX39AO00148 RNU6-710P-201ENST00000410424 105 ntBASIC0.72□□□□□ -2.29
DDX39AO00148 COX6CP6-201ENST00000490840 228 ntBASIC0.72□□□□□ -2.29
DDX39AO00148 MIR4659A-201ENST00000580269 81 ntBASIC0.72□□□□□ -2.29
DDX39AO00148 7SK.10-201ENST00000621414 298 ntBASIC0.72□□□□□ -2.29
DDX39AO00148 SNORD50B-201ENST00000364995 70 ntBASIC0.71□□□□□ -2.3
DDX39AO00148 RNU6-708P-201ENST00000384217 107 ntBASIC0.71□□□□□ -2.3
DDX39AO00148 MIR559-201ENST00000385188 96 ntBASIC0.71□□□□□ -2.3
DDX39AO00148 RNU6-994P-201ENST00000410507 111 ntBASIC0.71□□□□□ -2.3
DDX39AO00148 RNU11-2P-201ENST00000516898 142 ntBASIC0.71□□□□□ -2.3
DDX39AO00148 AC093027.1-201ENST00000546698 429 ntBASIC0.71□□□□□ -2.3
DDX39AO00148 AL355073.2-201ENST00000612106 557 ntBASIC0.71□□□□□ -2.3
DDX39AO00148 AL136317.1-201ENST00000612653 226 ntBASIC0.71□□□□□ -2.3
DDX39AO00148 AC133104.2-201ENST00000615272 193 ntBASIC0.71□□□□□ -2.3
DDX39AO00148 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.71□□□□□ -2.3
DDX39AO00148 RNU6-490P-201ENST00000362985 107 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 Y_RNA.146-201ENST00000363549 102 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 SNORD99-201ENST00000408612 74 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 RNU6-855P-201ENST00000410395 104 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 AC096644.2-201ENST00000429278 159 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 AC098614.3-201ENST00000438957 440 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 AC099799.1-201ENST00000439809 192 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 RNU6-1110P-201ENST00000516462 101 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 RNU6-911P-201ENST00000516523 104 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 SNORA20.3-201ENST00000516880 132 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 RN7SKP295-201ENST00000517264 153 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 AC007742.2-201ENST00000618226 398 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 MTND4LP32-201ENST00000636111 270 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 U6.92-201ENST00000636464 89 ntBASIC0.7□□□□□ -2.3
DDX39AO00148 SNORD14E-201ENST00000364009 85 ntBASIC0.69□□□□□ -2.3
DDX39AO00148 SNORD111-201ENST00000408139 94 ntBASIC0.69□□□□□ -2.3
DDX39AO00148 AC138393.2-201ENST00000414742 246 ntBASIC0.69□□□□□ -2.3
DDX39AO00148 MCFD2P1-201ENST00000417812 300 ntBASIC0.69□□□□□ -2.3
DDX39AO00148 RBM11P1-201ENST00000604951 799 ntBASIC0.69□□□□□ -2.3
DDX39AO00148 AC022441.3-201ENST00000605737 136 ntBASIC0.69□□□□□ -2.3
DDX39AO00148 RNU6-94P-201ENST00000607728 107 ntBASIC0.69□□□□□ -2.3
DDX39AO00148 AC025253.1-201ENST00000613623 543 ntBASIC0.69□□□□□ -2.3
DDX39AO00148 PVT1_3.1-201ENST00000620853 95 ntBASIC0.69□□□□□ -2.3
DDX39AO00148 MIR4251-201ENST00000635819 61 ntBASIC0.69□□□□□ -2.3
DDX39AO00148 Y_RNA.27-201ENST00000362540 103 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 Y_RNA.329-201ENST00000365209 107 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 Y_RNA.368-201ENST00000365547 113 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.68□□□□□ -2.3
DDX39AO00148 RNU6-277P-201ENST00000516272 106 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 RNU7-116P-201ENST00000516940 62 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 RNU6-699P-201ENST00000517081 110 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 AC036111.3-201ENST00000526389 112 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 AC008133.2-201ENST00000624540 351 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.68□□□□□ -2.3
DDX39AO00148 AC099654.14-201ENST00000638599 341 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 AC134026.1-201ENST00000623249 2239 ntBASIC0.68□□□□□ -2.3
DDX39AO00148 Y_RNA.259-201ENST00000364619 101 ntBASIC0.67□□□□□ -2.3
DDX39AO00148 Y_RNA.387-201ENST00000383918 102 ntBASIC0.67□□□□□ -2.3
DDX39AO00148 RNU6-1040P-201ENST00000383974 107 ntBASIC0.67□□□□□ -2.3
DDX39AO00148 RNU6-1323P-201ENST00000384025 107 ntBASIC0.67□□□□□ -2.3
DDX39AO00148 SNORD38C-201ENST00000384381 69 ntBASIC0.67□□□□□ -2.3
DDX39AO00148 SNORD116-29-201ENST00000384516 83 ntBASIC0.67□□□□□ -2.3
DDX39AO00148 MIR598-201ENST00000384868 97 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms