Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HMGN1P10-201ENST00000474557 553 ntBASIC1.17□□□□□ -2.22
NPIPA3F8WFD2 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
NPIPA3F8WFD2 AC117454.1-201ENST00000491120 168 ntBASIC1.17□□□□□ -2.22
NPIPA3F8WFD2 RNU6-897P-201ENST00000517135 105 ntBASIC1.17□□□□□ -2.22
NPIPA3F8WFD2 MIR7974-201ENST00000615835 79 ntBASIC1.17□□□□□ -2.22
NPIPA3F8WFD2 MIR376A1-201ENST00000616574 68 ntBASIC1.17□□□□□ -2.22
NPIPA3F8WFD2 AC027279.3-201ENST00000625055 122 ntBASIC1.17□□□□□ -2.22
NPIPA3F8WFD2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
NPIPA3F8WFD2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
NPIPA3F8WFD2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
NPIPA3F8WFD2 RNU4-80P-201ENST00000363200 141 ntBASIC1.16□□□□□ -2.22
NPIPA3F8WFD2 MIR526A1-201ENST00000384897 85 ntBASIC1.16□□□□□ -2.22
NPIPA3F8WFD2 MIR522-201ENST00000385071 87 ntBASIC1.16□□□□□ -2.22
NPIPA3F8WFD2 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
NPIPA3F8WFD2 RNU7-116P-201ENST00000516940 62 ntBASIC1.16□□□□□ -2.22
NPIPA3F8WFD2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.16□□□□□ -2.22
NPIPA3F8WFD2 AC024405.2-202ENST00000532731 184 ntBASIC1.16□□□□□ -2.22
NPIPA3F8WFD2 RAC1P9-201ENST00000604990 392 ntBASIC1.16□□□□□ -2.22
NPIPA3F8WFD2 Y_RNA.183-201ENST00000363882 113 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 U8.5-201ENST00000364528 136 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 U8.7-201ENST00000364940 136 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 MIR548P-201ENST00000408336 84 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 MIR1252-201ENST00000408861 65 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 SNRPGP10-201ENST00000432323 225 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 RPL23AP54-201ENST00000495129 419 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 AL133373.1-201ENST00000497098 94 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.721-201ENST00000517207 102 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 MIR4300-201ENST00000581016 96 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 MIR4762-201ENST00000585261 75 ntBASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.15□□□□□ -2.23
NPIPA3F8WFD2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 RNU6-1048P-201ENST00000364054 107 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.216-201ENST00000364205 93 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 RNU6-131P-201ENST00000391144 107 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 MIR1276-201ENST00000408707 83 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 MIR1298-201ENST00000408783 112 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 U8.19-201ENST00000459095 133 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 RNU7-115P-201ENST00000516433 55 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 SNORD45.4-201ENST00000516629 73 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 RNA5SP102-201ENST00000516865 106 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 MIR3171-201ENST00000584270 74 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 AP003357.1-201ENST00000604497 148 ntBASIC1.14□□□□□ -2.23
NPIPA3F8WFD2 RNU6-102P-201ENST00000384485 104 ntBASIC1.13□□□□□ -2.23
NPIPA3F8WFD2 MIR516B2-201ENST00000385190 85 ntBASIC1.13□□□□□ -2.23
NPIPA3F8WFD2 AC048334.1-201ENST00000477975 159 ntBASIC1.13□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.711-201ENST00000516993 102 ntBASIC1.13□□□□□ -2.23
NPIPA3F8WFD2 AL357312.1-201ENST00000603879 298 ntBASIC1.13□□□□□ -2.23
NPIPA3F8WFD2 MIR6504-201ENST00000613520 61 ntBASIC1.13□□□□□ -2.23
NPIPA3F8WFD2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.203-201ENST00000364106 102 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.269-201ENST00000364685 89 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 SNORD50B-201ENST00000364995 70 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.527-201ENST00000384573 102 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 MIR452-201ENST00000385020 85 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 SNORD115-46-201ENST00000390982 71 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 RNU2-14P-201ENST00000411053 191 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 RPL39P39-201ENST00000455840 151 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 LINC01399-202ENST00000458450 244 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 SNORA31.2-201ENST00000516019 134 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 SNORA40.15-201ENST00000516884 107 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.714-201ENST00000517065 90 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 MIR548AY-201ENST00000617669 107 ntBASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
NPIPA3F8WFD2 AC134026.1-201ENST00000623249 2239 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.105-201ENST00000363182 111 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 snoU2-30.1-201ENST00000365012 70 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 RNU6-939P-201ENST00000384634 107 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 RNU6-1248P-201ENST00000391096 64 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 HSPE1P25-201ENST00000455484 251 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 RNU7-141P-201ENST00000459304 62 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 RNU6-496P-201ENST00000516145 99 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 SNORA70.22-201ENST00000517160 124 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 AC136628.3-201ENST00000521868 290 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 AC020661.2-201ENST00000560114 134 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 AC127455.1-201ENST00000565496 145 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 AL022345.2-201ENST00000606307 135 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 JPX_2.1-201ENST00000614161 69 ntBASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
NPIPA3F8WFD2 RNU4-90P-201ENST00000362773 141 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.158-201ENST00000363651 101 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.191-201ENST00000363972 113 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 RNU6-801P-201ENST00000364087 105 ntBASIC1.1□□□□□ -2.23
NPIPA3F8WFD2 Y_RNA.222-201ENST00000364264 102 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms