Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC068339.1-201ENST00000526965 141 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNY4P6-201ENST00000363667 96 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 SNORA63D-201ENST00000364359 132 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-198P-201ENST00000384258 104 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-1152P-201ENST00000384576 107 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC107297.1-201ENST00000459991 176 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 MRPS17P9-201ENST00000511924 393 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 Y_RNA.666-201ENST00000516187 112 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNA5SP320-201ENST00000516263 124 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-830P-201ENST00000516353 107 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-113P-201ENST00000516653 101 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC026421.1-201ENST00000519101 163 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 CTSLP2-204ENST00000629029 392 ntBASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.57□□□□□ -2
C1QTNF3-AMACRE9PGA6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 Y_RNA.198-201ENST00000364013 98 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 Y_RNA.342-201ENST00000365352 113 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-1124P-201ENST00000384169 107 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 HMGN2P35-201ENST00000412164 270 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC016909.1-201ENST00000415916 166 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC008134.1-201ENST00000420943 193 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 RPL30P4-201ENST00000429309 333 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 Z98742.2-201ENST00000431564 187 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNY4P20-201ENST00000516678 93 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-126P-201ENST00000516685 103 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU7-172P-201ENST00000517125 64 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 MIR4438-201ENST00000585271 93 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC022217.4-201ENST00000604389 163 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 Y_RNA.818-201ENST00000618813 71 ntBASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
C1QTNF3-AMACRE9PGA6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-228P-201ENST00000362700 106 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU1-22P-201ENST00000363334 158 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 Y_RNA.213-201ENST00000364178 111 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 Y_RNA.265-201ENST00000364677 108 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-1292P-201ENST00000383856 107 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-301P-201ENST00000384277 107 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 MT-TI-201ENST00000387365 69 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 MIR759-201ENST00000390224 91 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-750P-201ENST00000390946 107 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 MIR1294-201ENST00000408503 142 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 EIF4EP4-201ENST00000424916 578 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC104389.3-201ENST00000445629 235 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 NDUFA4P2-201ENST00000489989 244 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 RPS29P21-201ENST00000496272 170 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-693P-201ENST00000516134 107 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 MIR4298-201ENST00000584380 73 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 MIR2052-201ENST00000636055 55 ntBASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
C1QTNF3-AMACRE9PGA6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-486P-201ENST00000363116 107 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU1-105P-201ENST00000363470 161 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNA5SP126-201ENST00000365092 109 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-1240P-201ENST00000365155 104 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-234P-201ENST00000365229 104 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 SNORD77.3-201ENST00000391113 65 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 AL445687.1-201ENST00000439946 251 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC097462.1-201ENST00000514125 324 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-948P-201ENST00000516374 107 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 SCARNA15-202ENST00000516881 127 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-1096P-201ENST00000517089 102 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC109329.2-201ENST00000519658 482 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC079598.5-201ENST00000547460 117 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 MIR5092-201ENST00000583139 88 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 MIR6733-201ENST00000635723 61 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 MIR376A2-201ENST00000636782 80 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 AC010680.1-201ENST00000590024 3590 ntBASIC2.54□□□□□ -2
C1QTNF3-AMACRE9PGA6 ICE2P2-201ENST00000483823 2787 ntBASIC2.53□□□□□ -2
C1QTNF3-AMACRE9PGA6 Y_RNA.107-201ENST00000363190 121 ntBASIC2.53□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-944P-201ENST00000364023 107 ntBASIC2.53□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-690P-201ENST00000365242 106 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 393.1 ms