Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 MIR5194-201ENST00000582634 120 ntBASIC1.63□□□□□ -2.15
SMCHD1A6NHR9 RMST_2.1-201ENST00000617263 136 ntBASIC1.63□□□□□ -2.15
SMCHD1A6NHR9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.63□□□□□ -2.15
SMCHD1A6NHR9 Y_RNA.54-201ENST00000362766 105 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 RNU6-159P-201ENST00000391080 106 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 RNU7-99P-201ENST00000516271 62 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 RNU7-149P-201ENST00000516739 59 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 MIR4724-201ENST00000579485 89 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 RNU1-22P-201ENST00000363334 158 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 RNU6-899P-201ENST00000363947 107 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 RNU6-484P-201ENST00000384016 107 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 Y_RNA.540-201ENST00000384638 111 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 RNU6-763P-201ENST00000390865 106 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 AL162725.1-201ENST00000435405 301 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 MTND2P29-201ENST00000438595 412 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 MTND1P19-201ENST00000511780 315 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 AL391903.3-201ENST00000612158 163 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 uc_338.20-201ENST00000621563 178 ntBASIC1.62□□□□□ -2.15
SMCHD1A6NHR9 RNU6-1084P-201ENST00000362498 107 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 SNORD68-201ENST00000363214 84 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 SNORA63D-201ENST00000364359 132 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 SNORA72-201ENST00000384339 132 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 MIR194-1-201ENST00000384892 85 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 SNORA26.5-201ENST00000391215 123 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RPS26P55-201ENST00000471178 356 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RNA5SP61-201ENST00000516453 100 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 MIR514B-201ENST00000516774 80 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 AC012433.1-201ENST00000588916 398 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 MIRLET7C-201ENST00000362160 84 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 SNORA1B-201ENST00000362535 133 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RNU4-80P-201ENST00000363200 141 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RNU6-674P-201ENST00000363831 107 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RNU6-926P-201ENST00000384075 107 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 AC245047.4-201ENST00000433189 144 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 AC009474.2-201ENST00000451383 136 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RN7SL274P-201ENST00000492268 272 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RNU6-1041P-201ENST00000516254 102 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RNA5SP437-201ENST00000517249 129 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RNU6-794P-201ENST00000517261 64 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RNU1-104P-201ENST00000517280 175 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 AC019176.1-201ENST00000518519 225 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 AC024405.2-202ENST00000532731 184 ntBASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.61□□□□□ -2.15
SMCHD1A6NHR9 RNU6-1164P-201ENST00000364428 107 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 SNORD114-22-201ENST00000365423 72 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 SNORA67.6-201ENST00000391093 99 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 AL603910.2-201ENST00000407268 136 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 SNORA36B-201ENST00000410438 131 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 RNA5SP511-201ENST00000410487 115 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 RNU5E-9P-201ENST00000411164 104 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 AC099677.2-201ENST00000436385 175 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 SNRPGP13-201ENST00000442212 177 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 DEFB108E-201ENST00000524692 240 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 MIR5688-201ENST00000580619 83 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 MIR4713-201ENST00000582691 75 ntBASIC1.6□□□□□ -2.15
SMCHD1A6NHR9 Y_RNA.76-201ENST00000362931 109 ntBASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 RNU6-23P-201ENST00000363283 107 ntBASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 Y_RNA.144-201ENST00000363521 113 ntBASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 Y_RNA.217-201ENST00000364214 105 ntBASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 MTND5P15-201ENST00000434246 349 ntBASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 AC104332.1-201ENST00000440471 797 ntBASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 Y_RNA.641-201ENST00000459414 105 ntBASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 AP002004.2-201ENST00000531656 154 ntBASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 MIR4762-201ENST00000585261 75 ntBASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 AL442067.1-201ENST00000613261 223 ntBASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SMCHD1A6NHR9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
SMCHD1A6NHR9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.59□□□□□ -2.16
SMCHD1A6NHR9 RNU4-41P-201ENST00000364426 143 ntBASIC1.59□□□□□ -2.16
SMCHD1A6NHR9 SNORA8.3-201ENST00000384679 139 ntBASIC1.59□□□□□ -2.16
SMCHD1A6NHR9 AC008134.1-201ENST00000420943 193 ntBASIC1.59□□□□□ -2.16
SMCHD1A6NHR9 AC010598.1-201ENST00000510378 103 ntBASIC1.59□□□□□ -2.16
SMCHD1A6NHR9 RNU7-116P-201ENST00000516940 62 ntBASIC1.59□□□□□ -2.16
SMCHD1A6NHR9 AC127455.1-201ENST00000565496 145 ntBASIC1.59□□□□□ -2.16
SMCHD1A6NHR9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.59□□□□□ -2.16
SMCHD1A6NHR9 MIR411-201ENST00000362239 96 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.117-201ENST00000363294 101 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.354-201ENST00000365448 111 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.416-201ENST00000384014 113 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 RNA5SP482-201ENST00000391269 118 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 RNU2-55P-201ENST00000411146 174 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 SNORD11-201ENST00000459124 84 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 AC090821.2-201ENST00000523552 176 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 MIR4282-201ENST00000583613 67 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 BX284668.6-201ENST00000606899 438 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 U2.14-201ENST00000615943 113 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 ZNF702P-202ENST00000434269 1966 ntBASIC1.58□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.20-201ENST00000362479 113 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 RNU6-740P-201ENST00000364734 105 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 RNU6-442P-201ENST00000383968 104 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 MIR548H3-201ENST00000408771 118 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 MIR1298-201ENST00000408783 112 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 RNU6-855P-201ENST00000410395 104 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 HSPE1P21-201ENST00000438283 308 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms