Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 Y_RNA.796-201ENST00000364268 102 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 RNU4-41P-201ENST00000364426 143 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 U8.5-201ENST00000364528 136 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 Y_RNA.799-201ENST00000364992 102 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 RNU6-1318P-201ENST00000365389 103 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 AL034345.1-201ENST00000407768 123 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 MIR1278-201ENST00000408753 81 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 RN7SKP101-201ENST00000411376 320 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 AC108059.2-201ENST00000434626 151 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 MIR4709-201ENST00000577272 72 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 AC130289.1-201ENST00000577321 73 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 AL021707.8-201ENST00000609428 183 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 MIR6840-201ENST00000611937 71 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 AL591926.4-201ENST00000616895 298 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 AC092881.1-201ENST00000638218 2733 ntBASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
TCRBV7S3A2A0A539 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 MIR367-201ENST00000362299 68 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 RNU6-661P-201ENST00000362409 107 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.83-201ENST00000363005 113 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 U8.2-201ENST00000363156 134 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 RNU6-1209P-201ENST00000363655 107 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.265-201ENST00000364677 108 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 RNU6-200P-201ENST00000364743 107 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.500-201ENST00000384466 111 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 RNU6-383P-201ENST00000410864 94 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 COX6CP10-201ENST00000416832 224 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 FTH1P12-201ENST00000432137 551 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 RPS27P21-201ENST00000486977 252 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.700-201ENST00000516806 100 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 AL627230.6-201ENST00000611129 280 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.77□□□□□ -2.13
TCRBV7S3A2A0A539 MIR411-201ENST00000362239 96 ntBASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 RNU4-10P-201ENST00000364383 140 ntBASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 MIR522-201ENST00000385071 87 ntBASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 SNORA40.18-201ENST00000391200 128 ntBASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 RN7SKP192-201ENST00000411291 327 ntBASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 STAG3L5P-204ENST00000443759 179 ntBASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 AC099513.1-201ENST00000490423 301 ntBASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 RNU1-41P-201ENST00000516161 162 ntBASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 RNU1-48P-201ENST00000516400 162 ntBASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 Z83818.1-201ENST00000603584 150 ntBASIC1.76□□□□□ -2.13
TCRBV7S3A2A0A539 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.24-201ENST00000362508 103 ntBASIC1.75□□□□□ -2.13
TCRBV7S3A2A0A539 RNU4-17P-201ENST00000365598 141 ntBASIC1.75□□□□□ -2.13
TCRBV7S3A2A0A539 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TCRBV7S3A2A0A539 RNU6-381P-201ENST00000391259 108 ntBASIC1.75□□□□□ -2.13
TCRBV7S3A2A0A539 RPL30P13-201ENST00000418873 348 ntBASIC1.75□□□□□ -2.13
TCRBV7S3A2A0A539 SNRPGP10-201ENST00000432323 225 ntBASIC1.75□□□□□ -2.13
TCRBV7S3A2A0A539 SNORD11-201ENST00000459124 84 ntBASIC1.75□□□□□ -2.13
TCRBV7S3A2A0A539 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
TCRBV7S3A2A0A539 AC021506.2-201ENST00000612354 169 ntBASIC1.75□□□□□ -2.13
TCRBV7S3A2A0A539 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 MIRLET7C-201ENST00000362160 84 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 MIR126-201ENST00000362291 85 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.229-201ENST00000364347 113 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.274-201ENST00000364714 101 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.435-201ENST00000384095 112 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 MIR194-1-201ENST00000384892 85 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 AC019129.1-201ENST00000403786 261 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 AL161935.2-201ENST00000414627 60 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 MRPS17P9-201ENST00000511924 393 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 RNU6-138P-201ENST00000515952 107 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 RPL23AP91-201ENST00000569211 455 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 AC087685.1-201ENST00000587507 141 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 AL096840.1-201ENST00000603287 93 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 AC090425.1-201ENST00000610007 140 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 JPX_2.1-201ENST00000614161 69 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 AL513423.1-201ENST00000621695 132 ntBASIC1.74□□□□□ -2.13
TCRBV7S3A2A0A539 snoU2_19.4-201ENST00000364329 80 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.308-201ENST00000365043 101 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 RNA5SP363-201ENST00000365072 115 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.785-201ENST00000384290 109 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 RNU6-424P-201ENST00000384367 105 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.572-201ENST00000384757 98 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 MIR616-201ENST00000385293 97 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 RNU7-34P-201ENST00000459394 64 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 RN7SKP164-201ENST00000516138 266 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 RNY3P16-201ENST00000516338 101 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.714-201ENST00000517065 90 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 CBX3P4-201ENST00000538909 354 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 AL391903.3-201ENST00000612158 163 ntBASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.121-201ENST00000363309 113 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 Y_RNA.297-201ENST00000364950 91 ntBASIC1.72□□□□□ -2.13
TCRBV7S3A2A0A539 RNY3P5-201ENST00000384127 102 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms