Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 DRAXINP1-201ENST00000437611 948 ntBASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 UNC93B7-201ENST00000509439 705 ntBASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 AC008556.1-201ENST00000610908 2040 ntBASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NPAS4Q8IUM7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 TEX21P-204ENST00000641479 1693 ntBASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 TPSP2-201ENST00000561760 610 ntBASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.23■□□□□ 0.83
NPAS4Q8IUM7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 TREX1-205ENST00000625293 1783 ntBASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 FDX1P1-201ENST00000449115 551 ntBASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 KRT17P6-201ENST00000453795 1220 ntBASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAS4Q8IUM7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPAS4Q8IUM7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms